RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	SEMA3C	Q99985	751 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	SDCBP2	Q9H190	292 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	XYLT2	Q9H1B5	865 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	CAAP1	Q9H8G2	361 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	LRRC4C	Q9HCJ2	640 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	FZD4	Q9ULV1	537 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	CA5B	Q9Y2D0	317 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	ENTPD2	Q9Y5L3	495 aa		12.22	□□□□□ -0.45
PAX6-238	ENST00000638755	CLEC18A	A5D8T8	446 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	PHACTR2	O75167	634 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	KIF20A	O95235	890 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	THEGL	P0DJG4	465 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	GOT1	P17174	413 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	CCR10	P46092	362 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	PSEN1	P49768	467 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	ST8SIA6	P61647	398 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	TGIF1	Q15583	401 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	SKIDA1	Q1XH10	827 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	CLEC18B	Q6UXF7	455 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	CLEC20A	Q6ZU45	233 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	PRPF39	Q86UA1	669 aa	Known RBP	12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	IQCH	Q86VS3	1027 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	FAM26E	Q8N5C1	309 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	AADAT	Q8N5Z0	425 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	CLEC18C	Q8NCF0	446 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	IFI44	Q8TCB0	444 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	TMA16	Q96EY4	203 aa	Known RBP	12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	CGRRF1	Q99675	332 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	SLC25A18	Q9H1K4	315 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	EPN3	Q9H201	632 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	MARCH2	Q9P0N8	246 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	TJP2	Q9UDY2	1190 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	HMGXB4	Q9UGU5	601 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	PCDHGA8	Q9Y5G5	932 aa		12.21	□□□□□ -0.45
PAX6-238	ENST00000638755	ICE1	Q9Y2F5	2266 aa		12.21	□□□□□ -0.46
PAX6-238	ENST00000638755	LY6G6E	A0A0G2JKS1	128 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	CPED1	A4D0V7	1026 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	C10orf142	B7Z368	130 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	LAT	O43561	262 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	KRT38	O76015	456 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	STAU1	O95793	577 aa	Known RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ALPPL2	P10696	532 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ATIC	P31939	592 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	CD70	P32970	193 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	KIF11	P52732	1056 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	NDST1	P52848	882 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	OVGP1	Q12889	678 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ALCAM	Q13740	583 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	SNRNP35	Q16560	246 aa	Known RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	TBR1	Q16650	682 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ZNF699	Q32M78	642 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	HNRNPA1L2	Q32P51	320 aa	Known RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ZNF667	Q5HYK9	610 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	CRTC1	Q6UUV9	634 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	RSRC2	Q7L4I2	434 aa	Known RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	CLEC14A	Q86T13	490 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	FAM217A	Q8IXS0	508 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	WFDC5	Q8TCV5	224 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ZNF516	Q92618	1163 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	DNAJC19	Q96DA6	116 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	KLHDC7B	Q96G42	594 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	KIAA1586	Q9HCI6	787 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	OLFML3	Q9NRN5	406 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	CLIC5	Q9NZA1	410 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	ARHGAP20	Q9P2F6	1191 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	STRIP2	Q9ULQ0	834 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	TPX2	Q9ULW0	747 aa	Known RBP	12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	LIMCH1	Q9UPQ0	1083 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	KIF3A	Q9Y496	699 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755		U3KQA8	63 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	DOCK9	Q9BZ29	2069 aa		12.2	□□□□□ -0.46
PAX6-238	ENST00000638755	LZTS3	O60299	673 aa	Predicted RBP	12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	GIMD1	P0DJR0	217 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	FOXK1	P85037	733 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	CDKN3	Q16667	212 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	BMT2	Q1RMZ1	405 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	C9orf64	Q5T6V5	341 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	RBM44	Q6ZP01	1051 aa	Known RBP	12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	CCDC186	Q7Z3E2	898 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	ZNF276	Q8N554	614 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	WDR36	Q8NI36	951 aa	Known RBP	12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	MYO19	Q96H55	970 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	EVA1B	Q9NVM1	165 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	NLGN3	Q9NZ94	848 aa		12.19	□□□□□ -0.46
PAX6-238	ENST00000638755	ITPR2	Q14571	2701 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	TTC34	A8MYJ7	566 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	RTN2	O75298	545 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	PIAS2	O75928	621 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	NEBL	O76041	1014 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	ITGA2B	P08514	1039 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	SLC5A2	P31639	672 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	LONP1	P36776	959 aa	Known RBP	12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	HARS2	P49590	506 aa	Known RBP	12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	SGSH	P51688	502 aa		12.18	□□□□□ -0.46
PAX6-238	ENST00000638755	CYP4F2	P78329	520 aa		12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms