RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 ARMCX1Q9P291 453 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 SHOC2Q9UQ13 582 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 MAST1Q9Y2H9 1570 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FAM172BPA6NC97 362 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FOXN3O00409 490 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 GALCP54803 685 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 MND1Q9BWT6 205 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ANKRD6Q9Y2G4 727 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ATP4AP20648 1035 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TMPRSS6Q8IU80 811 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 GRPEL2Q8TAA5 225 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 CELF4Q9BZC1 486 aaKnown RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 NAGPAQ9UK23 515 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TFRCP02786 760 aaKnown RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PRKCBP05771 671 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 SLC11A2P49281 568 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 FRG1Q14331 258 aaKnown RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 NRF1Q16656 503 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 PREPLQ4J6C6 727 aaPredicted RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
UBE3A-228ENST00000638155 BRINP3Q76B58 766 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF677Q86XU0 584 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 ATP6V0D2Q8N8Y2 350 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 RNF149Q8NC42 400 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 TNFAIP8L1Q8WVP5 186 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 SNX7Q9UNH6 387 aa13.38□□□□□ -0.27
UBE3A-228ENST00000638155 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 BBOX1O75936 387 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ARPC4P59998 168 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 SULT1C3Q6IMI6 304 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 MFSD7Q6UXD7 560 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF354BQ96LW1 612 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 PHB2Q99623 299 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 XKR8Q9H6D3 395 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 DNAJC10Q8IXB1 793 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 CCSER2Q9H7U1 834 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 AGAP1Q9UPQ3 857 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 COL17A1Q9UMD9 1497 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 PDXKO00764 312 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 SNAP91O60641 907 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 RECQL5O94762 991 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 THRBP10828 461 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 PPP2R2BQ00005 443 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 KLHL23Q8NBE8 558 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 CCNT2O60583 730 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ART5Q96L15 291 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 PABPC3Q9H361 631 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 RAPGEFL1Q9UHV5 662 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 GPN3Q9UHW5 284 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 FAM136AQ96C01 138 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ERMAPQ96PL5 475 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 GORASP1Q9BQQ3 440 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 RIOK2Q9BVS4 552 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 EXO5Q9H790 373 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 C2orf71A6NGG8 1288 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ERI2A8K979 691 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ADSSP30520 456 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 AHCYL2Q96HN2 611 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 COMTP21964 271 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 XIAPP98170 497 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ILF2Q12905 390 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 ARPINQ7Z6K5 226 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
UBE3A-228ENST00000638155 REXO5Q96IC2 774 aaKnown RBP13.37□□□□□ -0.27
UBE3A-228ENST00000638155 DBTP11182 482 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF214Q9UL59 606 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 C2CD2Q9Y426 696 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 F5H5T6 163 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 RPL4P36578 427 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 MNDAP41218 407 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 FAM131AQ6UXB0 335 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 BHLHE22Q8NFJ8 381 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 CYP3A43Q9HB55 503 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 GPAMQ9HCL2 828 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 CRYL1Q9Y2S2 319 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 RBP3P10745 1247 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 NTSP30990 170 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ZNHIT3Q15649 155 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 FAR1Q8WVX9 515 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 CKAP2Q8WWK9 683 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 WDCPQ9H6R7 721 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ITIH6Q6UXX5 1313 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 IRGMA1A4Y4 181 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SLC33A1O00400 549 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 MAFKO60675 156 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms