RNA–Protein interactions for RNA: ENST00000637985.1

CLN3-264, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-264ENST00000637985 ADIPOR2Q86V24 386 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 DENND1CQ8IV53 801 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 CRYBG2Q8N1P7 616 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 EXD3Q8N9H8 876 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 WFIKKN2Q8TEU8 576 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 CCDC34Q96HJ3 373 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 VCPIP1Q96JH7 1222 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.03■□□□□ 0.32
CLN3-264ENST00000637985 THSD1Q9NS62 852 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 FBXL12Q9NXK8 326 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 SERGEFQ9UGK8 458 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 NAGPAQ9UK23 515 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 TRAF3IP3Q9Y228 551 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 FRMD4BQ9Y2L6 1034 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
CLN3-264ENST00000637985 MYO9AB2RTY4 2548 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 TRIM38O00635 465 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 SIGLEC6O43699 453 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 HOXD9P28356 352 aaPredicted RBP17.02■□□□□ 0.32
CLN3-264ENST00000637985 CCR5P51681 352 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 SKOR1P84550 965 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 ZNF211Q13398 564 aaPredicted RBP17.02■□□□□ 0.32
CLN3-264ENST00000637985 NCOA4Q13772 614 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 NFIL3Q16649 462 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 ZNF574Q6ZN55 896 aaPredicted RBP17.02■□□□□ 0.32
CLN3-264ENST00000637985 CLEC20AQ6ZU45 233 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 KIAA0907Q7Z7F0 614 aaPredicted RBP17.02■□□□□ 0.32
CLN3-264ENST00000637985 SPATS2Q86XZ4 545 aaKnown RBP17.02■□□□□ 0.32
CLN3-264ENST00000637985 ZC3H3Q8IXZ2 948 aaKnown RBP17.02■□□□□ 0.32
CLN3-264ENST00000637985 OR2T34Q8NGX1 318 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 TMC2Q8TDI7 906 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 GANCQ8TET4 914 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 SDCBP2Q9H190 292 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 CLIC5Q9NZA1 410 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 ANKMY1Q9P2S6 941 aa17.02■□□□□ 0.32
CLN3-264ENST00000637985 LRRK2Q5S007 2527 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 TLN1Q9Y490 2541 aaKnown RBP17.01■□□□□ 0.31
CLN3-264ENST00000637985 LRRC72A6NJI9 287 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 IKBKBO14920 756 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 MAPK13O15264 365 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 ZNF202O95125 648 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 HMBSP08397 361 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 DLDP09622 509 aaKnown RBP17.01■□□□□ 0.31
CLN3-264ENST00000637985 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 FAM200BP0CF97 657 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 RALAP11233 206 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 ZNF699Q32M78 642 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 SLC45A4Q5BKX6 768 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 ZNF667Q5HYK9 610 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 IGF2-ASQ6U949 168 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 ATG14Q6ZNE5 492 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 CHST9Q7L1S5 443 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLN3-264ENST00000637985 SERAC1Q96JX3 654 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 DEPDC7Q96QD5 511 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 CDK5RAP1Q96SZ6 601 aaKnown RBP17.01■□□□□ 0.31
CLN3-264ENST00000637985 NEUROG2Q9H2A3 272 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 GOLPH3LQ9H4A5 285 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 RASAL2Q9UJF2 1139 aa17.01■□□□□ 0.31
CLN3-264ENST00000637985 NBPF19A0A087WUL8 3843 aa17■□□□□ 0.31
CLN3-264ENST00000637985 OPA1O60313 960 aa17■□□□□ 0.31
CLN3-264ENST00000637985 P4HA1P13674 534 aa17■□□□□ 0.31
CLN3-264ENST00000637985 KIF11P52732 1056 aa17■□□□□ 0.31
CLN3-264ENST00000637985 EFEMP1Q12805 493 aa17■□□□□ 0.31
CLN3-264ENST00000637985 SGSM1Q2NKQ1 1148 aa17■□□□□ 0.31
CLN3-264ENST00000637985 ZACNQ401N2 412 aa17■□□□□ 0.31
CLN3-264ENST00000637985 MPPE1Q53F39 396 aa17■□□□□ 0.31
CLN3-264ENST00000637985 CEP135Q66GS9 1140 aa17■□□□□ 0.31
CLN3-264ENST00000637985 CCDC186Q7Z3E2 898 aa17■□□□□ 0.31
CLN3-264ENST00000637985 GUF1Q8N442 669 aaKnown RBP17■□□□□ 0.31
CLN3-264ENST00000637985 C12orf29Q8N999 325 aa17■□□□□ 0.31
CLN3-264ENST00000637985 MFSD2AQ8NA29 543 aa17■□□□□ 0.31
CLN3-264ENST00000637985 TAF4BQ92750 862 aa17■□□□□ 0.31
CLN3-264ENST00000637985 JAKMIP2Q96AA8 810 aa17■□□□□ 0.31
CLN3-264ENST00000637985 MTG2Q9H4K7 406 aa17■□□□□ 0.31
CLN3-264ENST00000637985 PNPLA8Q9NP80 782 aa17■□□□□ 0.31
CLN3-264ENST00000637985 STARD5Q9NSY2 213 aa17■□□□□ 0.31
CLN3-264ENST00000637985 FAM49BQ9NUQ9 324 aa17■□□□□ 0.31
CLN3-264ENST00000637985 A0A1W2PP55 124 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 CSO75390 466 aaKnown RBP16.99■□□□□ 0.31
CLN3-264ENST00000637985 VNN1O95497 513 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
CLN3-264ENST00000637985 RPL13P26373 211 aaKnown RBP16.99■□□□□ 0.31
CLN3-264ENST00000637985 DLG4P78352 724 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 NUCB2P80303 420 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 ENPEPQ07075 957 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 SFSWAPQ12872 951 aaKnown RBP16.99■□□□□ 0.31
CLN3-264ENST00000637985 C6orf132Q5T0Z8 1188 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 MBLAC2Q68D91 279 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 SCARA5Q6ZMJ2 495 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 CCDC81Q6ZN84 652 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 AHI1Q8N157 1196 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 SLC25A45Q8N413 288 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 GDPD2Q9HCC8 539 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 ABCB8Q9NUT2 735 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 HMGXB4Q9UGU5 601 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 GGA2Q9UJY4 613 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 FZD4Q9ULV1 537 aa16.99■□□□□ 0.31
CLN3-264ENST00000637985 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms