RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 PCYOX1Q9UHG3 505 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 NOCTQ9UK39 431 aaKnown RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.67□□□□□ -1.5
CHD2-227ENST00000637572 CDY1Q9Y6F8 540 aa5.67□□□□□ -1.5
CHD2-227ENST00000637572 A0A1W2PQ67 120 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 DNALI1O14645 258 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 FSCN2O14926 492 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 JCHAINP01591 159 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 ITGAVP06756 1048 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 HIST1H2AGP0C0S8 130 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 HIST1H2ADP20671 130 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 YBEYP58557 167 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 LPIN1Q14693 890 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 GRM3Q14832 879 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 MTFR1Q15390 333 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 ANKRD20A8PQ5CZ79 823 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 NXNQ6DKJ4 435 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 XYLT1Q86Y38 959 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 LGI2Q8N0V4 545 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 NOA1Q8NC60 698 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 GPR152Q8TDT2 470 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 FOXJ1Q92949 421 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CAVIN3Q969G5 261 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 HIST1H2AHQ96KK5 128 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 HIST1H2AJQ99878 128 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 H2AFJQ9BTM1 129 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 STRA6Q9BX79 667 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 POLR1EQ9GZS1 481 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 SIX2Q9NPC8 291 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 FNIP2Q9P278 1114 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 UBA2Q9UBT2 640 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 FNDC3AQ9Y2H6 1198 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 PAPPA2Q9BXP8 1791 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 EP400Q96L91 3159 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CLDN11O75508 207 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 DCTN3O75935 186 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 VNN1O95497 513 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 HSPA4LO95757 839 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 GGCXP38435 758 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TMPRSS15P98073 1019 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 SLC39A4Q6P5W5 647 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 APTXQ7Z2E3 356 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 PALB2Q86YC2 1186 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 MFN1Q8IWA4 741 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TBC1D19Q8N5T2 526 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CSGALNACT1Q8TDX6 532 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 ACSF2Q96CM8 615 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 DDX23Q9BUQ8 820 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 SNRNP25Q9BV90 132 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 HSD3B7Q9H2F3 369 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 C20orf96Q9NUD7 363 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 GPATCH2LQ9NWQ4 482 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TAS2R14Q9NYV8 317 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 HACD3Q9P035 362 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 FAM153AQ9UHL3 310 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 GJD2Q9UKL4 321 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 GRID1Q9ULK0 1009 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TFR2Q9UP52 801 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TRIM33Q9UPN9 1127 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 A0A1B0GUL6 1792 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 LAMB1P07942 1786 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 UBA6A0AVT1 1052 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 HAS3O00219 553 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CHADO15335 359 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 SYNCRIPO60506 623 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 GPR32O75388 356 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 ITGALP20701 1170 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 DDX6P26196 483 aaKnown RBP eCLIP5.66□□□□□ -1.5
CHD2-227ENST00000637572 TNFRSF8P28908 595 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 MAGEA11P43364 429 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CARSP49589 748 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 MAGOHP61326 146 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 ADCY1Q08828 1119 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 FSCBQ5H9T9 825 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 SCARA3Q6AZY7 606 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 EFL1Q7Z2Z2 1120 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 CREG2Q8IUH2 290 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 NIPA2Q8N8Q9 360 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 C12orf29Q8N999 325 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 COLGALT1Q8NBJ5 622 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CCDC126Q96EE4 140 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 BCAS3Q9H6U6 928 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 APOBEC3GQ9HC16 384 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 MYH8P13535 1937 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 MYH6P13533 1939 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 A0A0A0MRY4 1105 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 HEATR9A2RTY3 570 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 PROZP22891 400 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 ADRA1BP35368 520 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 DMRTA1Q5VZB9 504 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 ERAP2Q6P179 960 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 KCNT2Q6UVM3 1135 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 RFX8Q6ZV50 586 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CMTR2Q8IYT2 770 aaKnown RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 ZNF669Q96BR6 464 aaPredicted RBP5.66□□□□□ -1.5
CHD2-227ENST00000637572 PLD4Q96BZ4 506 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 PCED1BQ96HM7 432 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 SPATA13Q96N96 652 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 PITPNM3Q9BZ71 974 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TRABDQ9H4I3 376 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms