RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MFSD6LQ8IWD5 586 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 ADHFE1Q8IWW8 467 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 RHOT1Q8IXI2 618 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 CCAR2Q8N163 923 aaKnown RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 EMC1Q8N766 993 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 MAB21L3Q8N8X9 362 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 LRRC57Q8N9N7 239 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 ITFG1Q8TB96 612 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 KIAA1524Q8TCG1 905 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 SH3RF2Q8TEC5 729 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 FAM172AQ8WUF8 416 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 EDEM1Q92611 657 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 DNASE1L2Q92874 299 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 ATP2A3Q93084 1043 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 TCEAL4Q96EI5 215 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 RBM41Q96IZ5 413 aaKnown RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 FCRL2Q96LA5 508 aaPredicted RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 DESI2Q9BSY9 194 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 SLC46A2Q9BY10 475 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 LACRTQ9GZZ8 138 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 OSBPL2Q9H1P3 480 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 WDCPQ9H6R7 721 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 TRPC7Q9HCX4 862 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 PIGVQ9NUD9 493 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 MARK1Q9P0L2 795 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 PPARGC1AQ9UBK2 798 aaKnown RBP6.96□□□□□ -1.3
UPF3B-205ENST00000636792 USP18Q9UMW8 372 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 EFR3BQ9Y2G0 817 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 COL4A3Q01955 1670 aa6.96□□□□□ -1.3
UPF3B-205ENST00000636792 LEFTY2O00292 366 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CES2O00748 559 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CHADO15335 359 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 FGF10O15520 208 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 SPOPO43791 374 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ACSL4O60488 711 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 BUB1BO60566 1050 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 GRAP2O75791 330 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 PRAMEF12O95522 483 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CYBBP04839 570 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 GLULP15104 373 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 PSMC3P17980 439 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 FCARP24071 287 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CTNNA2P26232 953 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CORO1AP31146 461 aaKnown RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 L1CAMP32004 1257 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CTNNA1P35221 906 aaKnown RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 PTPN7P35236 360 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CETN2P41208 172 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 EIF2DP41214 584 aaKnown RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 HCAR3P49019 387 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 NTHL1P78549 312 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ATP11AP98196 1134 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 AMPD2Q01433 879 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 PFKPQ01813 784 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 OGDHQ02218 1023 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 SLC25A11Q02978 314 aaKnown RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 NME3Q13232 169 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CLN3Q13286 438 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 HTR4Q13639 388 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 DPYSL2Q16555 572 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 C5orf22Q49AR2 442 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 FAM78AQ5JUQ0 283 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 RABGAP1LQ5R372 815 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ADGRF1Q5T601 910 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ERMARDQ5T6L9 678 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 RNF43Q68DV7 783 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CC2D1AQ6P1N0 951 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 LRRC31Q6UY01 552 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CYP2U1Q7Z449 544 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ZSCAN30Q86W11 494 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 MIB1Q86YT6 1006 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 SUGP1Q8IWZ8 645 aaKnown RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 UBL4BQ8N7F7 174 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 FAM71BQ8TC56 605 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 OSCP1Q8WVF1 389 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ING5Q8WYH8 240 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 USP13Q92995 863 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-205ENST00000636792 CD101Q93033 1021 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 RNF34Q969K3 372 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 MYADMQ96S97 322 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ZNF670Q9BS34 389 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 RNF38Q9H0F5 515 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 TKTL2Q9H0I9 626 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 SFMBT1Q9UHJ3 866 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 AMFRQ9UKV5 643 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 GUCA1BQ9UMX6 200 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 AP4E1Q9UPM8 1137 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 JRKLQ9Y4A0 524 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 ALG6Q9Y672 507 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 TICRRQ7Z2Z1 1910 aa6.95□□□□□ -1.3
UPF3B-205ENST00000636792 IGLV3-10A0A075B6K4 115 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 A0A1B0GVM2 712 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 MACROD2A1Z1Q3 448 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 GRID2IPA4D2P6 1211 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 TCAF2A6NFQ2 919 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 HEPACAM2A8MVW5 462 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 WASH4PA8MWX3 477 aa6.94□□□□□ -1.3
UPF3B-205ENST00000636792 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.94□□□□□ -1.3
UPF3B-205ENST00000636792 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms