RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 ISXQ2M1V0 245 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 SGO2Q562F6 1265 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 C9orf64Q5T6V5 341 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 SND1Q7KZF4 910 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLN6-212ENST00000636020 EPM2AIP1Q7L775 607 aaPredicted RBP18.89■□□□□ 0.61
CLN6-212ENST00000636020 TMC6Q7Z403 805 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 AADATQ8N5Z0 425 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 OR14C36Q8NHC7 312 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 ZNF507Q8TCN5 953 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 TTC17Q96AE7 1141 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 PRR11Q96HE9 360 aaPredicted RBP18.89■□□□□ 0.61
CLN6-212ENST00000636020 TWNKQ96RR1 684 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 TJP2Q9UDY2 1190 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 NBPF19A0A087WUL8 3843 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 EFSO43281 561 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 NEFLP07196 543 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 GIMD1P0DJR0 217 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 HARS2P49590 506 aaKnown RBP18.88■□□□□ 0.61
CLN6-212ENST00000636020 AP3M2P53677 418 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 ST8SIA6P61647 398 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 CLN3Q13286 438 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 UBAP2LQ14157 1087 aaKnown RBP18.88■□□□□ 0.61
CLN6-212ENST00000636020 ARID5BQ14865 1188 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 HS1BP3Q53T59 392 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 C3orf38Q5JPI3 329 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 RSRC2Q7L4I2 434 aaKnown RBP18.88■□□□□ 0.61
CLN6-212ENST00000636020 PRPF39Q86UA1 669 aaKnown RBP18.88■□□□□ 0.61
CLN6-212ENST00000636020 ARHGAP18Q8N392 663 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 FAM129BQ96TA1 746 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 DUSP16Q9BY84 665 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 OSBPL2Q9H1P3 480 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 UCKL1Q9NWZ5 548 aa18.88■□□□□ 0.61
CLN6-212ENST00000636020 CDRT15L2A8MXV6 281 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 KIF20AO95235 890 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 SGSHP51688 502 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 SNRPFP62306 86 aaKnown RBP18.87■□□□□ 0.61
CLN6-212ENST00000636020 CLDN10P78369 228 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 SGSM1Q2NKQ1 1148 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 ADGRF1Q5T601 910 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 CCDC73Q6ZRK6 1079 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 LMLNQ96KR4 655 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 MRGPRX3Q96LB0 322 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 ABCG4Q9H172 646 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 FBXO2Q9UK22 296 aaPredicted RBP18.87■□□□□ 0.61
CLN6-212ENST00000636020 PCDHGA8Q9Y5G5 932 aa18.87■□□□□ 0.61
CLN6-212ENST00000636020 DOCK9Q9BZ29 2069 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 USP9YO00507 2555 aaPredicted RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3DA0A087WVF3 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3IA0A087WXS9 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 A0A087X0B3 334 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3EA0A087X179 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3KA0A087X1G2 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 LY6G6EA0A0G2JKS1 128 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TARSL2A2RTX5 802 aaKnown RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3FA6NER0 549 aaPredicted RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 LRRIQ3A6PVS8 624 aaPredicted RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3LB9A6J9 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 FFAR2O15552 330 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3HP0C7X1 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 MYF5P13349 255 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TRIM21P19474 475 aaKnown RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 C5AR1P21730 350 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TXLNAP40222 546 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 STAT6P42226 847 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 ASPAP45381 313 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 YWHAGP61981 247 aaKnown RBP eCLIP18.86■□□□□ 0.61
CLN6-212ENST00000636020 ZSCAN23Q3MJ62 389 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 MPP7Q5T2T1 576 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3GQ6DHY5 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3CQ6IPX1 549 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 TBC1D3Q8IZP1 549 aaPredicted RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 PARD3BQ8TEW8 1205 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 GRAMD1AQ96CP6 724 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 APOLD1Q96LR9 279 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 CLIC6Q96NY7 704 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 CCNL2Q96S94 520 aaPredicted RBP18.86■□□□□ 0.61
CLN6-212ENST00000636020 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 DMTF1Q9Y222 760 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 U3KQA8 63 aa18.86■□□□□ 0.61
CLN6-212ENST00000636020 ASLP04424 464 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 SLFN14P0C7P3 912 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 NUDT1P36639 197 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 PSMD8P48556 350 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 INCA1Q0VD86 236 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 STAT4Q14765 748 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 SPOPLQ6IQ16 392 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 KDM1BQ8NB78 822 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 ATXN7L3BQ96GX2 97 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 NT5C1AQ9BXI3 368 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 KLHL11Q9NVR0 708 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 CYTH4Q9UIA0 394 aa18.85■□□□□ 0.61
CLN6-212ENST00000636020 INTS6Q9UL03 887 aaKnown RBP18.85■□□□□ 0.61
CLN6-212ENST00000636020 HBS1LQ9Y450 684 aaKnown RBP18.85■□□□□ 0.61
CLN6-212ENST00000636020 SRPRBQ9Y5M8 271 aaKnown RBP18.85■□□□□ 0.61
CLN6-212ENST00000636020 TDRD6O60522 2096 aaKnown RBP18.85■□□□□ 0.61
CLN6-212ENST00000636020 TEP1Q99973 2627 aaKnown RBP18.84■□□□□ 0.61
CLN6-212ENST00000636020 TTC34A8MYJ7 566 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 LATS1O95835 1130 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 ADH1BP00325 375 aa18.84■□□□□ 0.61
CLN6-212ENST00000636020 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms