RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SSC5DA1L4H1 1573 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ATICP31939 592 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 MXD4Q14582 209 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 SLC9B1Q4ZJI4 515 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 FAM182AQ5T1J6 154 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 ACBD5Q5T8D3 534 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 IYDQ6PHW0 289 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 UNC5BQ8IZJ1 945 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 PGAM4Q8N0Y7 254 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 ZNF781Q8N8C0 355 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 ZNF526Q8TF50 670 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 KBTBD7Q8WVZ9 684 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 STON2Q8WXE9 905 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 ISL2Q96A47 359 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 CDRT15Q96T59 188 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 RNPEPQ9H4A4 650 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 PDZD7Q9H5P4 517 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 FAM124BQ9H5Z6 455 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 THOP1P52888 689 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 SP2Q02086 613 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 DGKZQ13574 1117 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 PPP6R3Q5H9R7 873 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 KCNT2Q6UVM3 1135 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 TSHZ1Q6ZSZ6 1077 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 SNX32Q86XE0 403 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 LRRC43Q8N309 656 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 TTC39CQ8N584 583 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 TDRD5Q8NAT2 981 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 ILKAPQ9H0C8 392 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 RPF1Q9H9Y2 349 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 MAN1C1Q9NR34 630 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 SIX4Q9UIU6 781 aa15.17■□□□□ 0.02
CACNA1A-220ENST00000635988 A0A0A0MRY4 1105 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 PRSS51A0A1B0GVH4 220 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 HACD1B0YJ81 288 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 GAS2O43903 313 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 TRIM13O60858 407 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 CDH2P19022 906 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 ME2P23368 584 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 SERPINB5P36952 375 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 MAGEA12P43365 314 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 HERC3Q15034 1050 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 STXBP2Q15833 593 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 CA9Q16790 459 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 FAM160B1Q5W0V3 765 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 LCLAT1Q6UWP7 414 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 CPSF7Q8N684 471 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 SPATA13Q96N96 652 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 VRTNQ9H8Y1 702 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 COPS7BQ9H9Q2 264 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 SNX15Q9NRS6 342 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 HMGXB4Q9UGU5 601 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 DOCK5Q9H7D0 1870 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 SCN4AP35499 1836 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 GRAP2O75791 330 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 BCAS2O75934 225 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 MPOP05164 745 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 POLBP06746 335 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 PSMC3P17980 439 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 GBE1Q04446 702 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 DPYSL2Q16555 572 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 PPM1JQ5JR12 505 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 ERI1Q8IV48 349 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 EXOC8Q8IYI6 725 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 TRPC4APQ8TEL6 797 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 NLRP7Q8WX94 980 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 PLEKHG4BQ96PX9 1271 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 SLC2A11Q9BYW1 496 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 G3BP2Q9UN86 482 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 CEPT1Q9Y6K0 416 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 SQORQ9Y6N5 450 aa15.16■□□□□ 0.02
CACNA1A-220ENST00000635988 XRCC1P18887 633 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SLC5A2P31639 672 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SPRP35270 261 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 MAGEA8P43361 318 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SNX16P57768 344 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 PPIDQ08752 370 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 RFTN1Q14699 578 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SPANXN3Q5MJ09 141 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 ATF7IP2Q5U623 682 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 CROCCP3Q8IVE0 287 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 REPS2Q8NFH8 660 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 BHLHE22Q8NFJ8 381 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 PDCD6IPQ8WUM4 868 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 HTR3CQ8WXA8 447 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 OR52B2Q96RD2 323 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 PTPRHQ9HD43 1115 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 RHBDL2Q9NX52 303 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 SLC17A6Q9P2U8 582 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 EPS15L1Q9UBC2 864 aa15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 RSL24D1Q9UHA3 163 aaKnown RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 BARX2Q9UMQ3 279 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-220ENST00000635988 PSAT1Q9Y617 370 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms