RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PDGFRAP16234 1089 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 TFE3P19532 575 aaPredicted RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 SDC4P31431 198 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 RDXP35241 583 aaKnown RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 P2RY2P41231 377 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 OXCT1P55809 520 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 ATP11AP98196 1134 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 ACBD5Q5T8D3 534 aaPredicted RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 RNF43Q68DV7 783 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 PPP1R2P3Q6NXS1 205 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 FBXL22Q6P050 247 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 KIAA1324Q6UXG2 1013 aaKnown RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 LRRC31Q6UY01 552 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 PHF13Q86YI8 300 aaPredicted RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 EMC1Q8N766 993 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 BAP1Q92560 729 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 PPP1R9BQ96SB3 815 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 PRMT1Q99873 361 aaKnown RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 DUSP15Q9H1R2 295 aaPredicted RBP16.21■□□□□ 0.19
LINC00339-207ENST00000634712 ARRDC1-AS1Q9H2J1 176 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 ARHGEF38Q9NXL2 777 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 CALCOCO1Q9P1Z2 691 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 VANGL2Q9ULK5 521 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 HS3ST4Q9Y661 456 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 FRYLO94915 3013 aa16.21■□□□□ 0.19
LINC00339-207ENST00000634712 SPAG17Q6Q759 2223 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.2■□□□□ 0.18
LINC00339-207ENST00000634712 A0A1B0GVM2 712 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 ANKRD62A6NC57 917 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 TCAF2A6NFQ2 919 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 ASLP04424 464 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 TPM3P06753 285 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 NDUFV2P19404 249 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 CSKP41240 450 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
LINC00339-207ENST00000634712 ZNF177Q13360 481 aaPredicted RBP16.2■□□□□ 0.18
LINC00339-207ENST00000634712 SLC12A1Q13621 1099 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 ENPP2Q13822 863 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 FUT11Q495W5 492 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 FSCBQ5H9T9 825 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 ACAD10Q6JQN1 1059 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 LPCAT2Q7L5N7 544 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
LINC00339-207ENST00000634712 RXFP2Q8WXD0 754 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 TTC17Q96AE7 1141 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 PRDM16Q9HAZ2 1276 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 SUN2Q9UH99 717 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 EML5Q05BV3 1969 aa16.2■□□□□ 0.18
LINC00339-207ENST00000634712 EPN2O95208 641 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 ACADMP11310 421 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 HLA-EP13747 358 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 BCKDHBP21953 392 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 PRKCHP24723 683 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 DHPSP49366 369 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-207ENST00000634712 CREB5Q02930 508 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 KLHL30Q0D2K2 578 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 CDO1Q16878 200 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 MAP7D1Q3KQU3 841 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 ARL13BQ3SXY8 428 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 PITRM1Q5JRX3 1037 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 OTUD1Q5VV17 481 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-207ENST00000634712 RNF219Q5W0B1 726 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-207ENST00000634712 DNAJC24Q6P3W2 148 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 SLC36A4Q6YBV0 504 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 CIR1Q86X95 450 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-207ENST00000634712 PRCCQ92733 491 aaPredicted RBP16.19■□□□□ 0.18
LINC00339-207ENST00000634712 IGSF8Q969P0 613 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 MRGPRX1Q96LB2 322 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 ADAM33Q9BZ11 813 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 HAUS4Q9H6D7 363 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 SEMA4GQ9NTN9 838 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 AIPL1Q9NZN9 384 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 IFNKQ9P0W0 207 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 PCDHGA5Q9Y5G8 931 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 GVINP1Q7Z2Y8 2422 aa16.19■□□□□ 0.18
LINC00339-207ENST00000634712 TMCO5BA8MYB1 307 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 FOXD2O60548 495 aaPredicted RBP16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CLDN11O75508 207 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 DESP17661 470 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 GGCXP38435 758 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 NNMTP40261 264 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 ATXN1P54253 815 aaKnown RBP16.18■□□□□ 0.18
LINC00339-207ENST00000634712 GSCP56915 257 aaPredicted RBP16.18■□□□□ 0.18
LINC00339-207ENST00000634712 PTP4A2Q12974 167 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CSRP2Q16527 193 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CCDC14Q49A88 953 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 FIGNQ5HY92 759 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 PMS2CLQ68D20 193 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 TRNP1Q6NT89 227 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 MON1BQ7L1V2 547 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 FAM131BQ86XD5 332 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 TMPRSS6Q8IU80 811 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 C3orf20Q8ND61 904 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 JOSD2Q8TAC2 188 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CPLX3Q8WVH0 158 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 IQCDQ96DY2 449 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 SIPA1Q96FS4 1042 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 LMLNQ96KR4 655 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 C1orf74Q96LT6 269 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms