RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 ZNF530Q6P9A1 599 aaPredicted RBP3.93□□□□□ -1.78
CHD2-219ENST00000630016 USP43Q70EL4 1123 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 CTU1Q7Z7A3 348 aaKnown RBP3.93□□□□□ -1.78
CHD2-219ENST00000630016 C12orf76Q8N812 135 aaPredicted RBP3.93□□□□□ -1.78
CHD2-219ENST00000630016 CNBD1Q8NA66 436 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 B4GALNT2Q8NHY0 566 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 SLC25A28Q96A46 364 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 PPP1R10Q96QC0 940 aaKnown RBP3.93□□□□□ -1.78
CHD2-219ENST00000630016 POLR3GLQ9BT43 218 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 TRIM5Q9C035 493 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 TMEM8AQ9HCN3 771 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 SELENONQ9NZV5 590 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 SRP68Q9UHB9 627 aaKnown RBP3.93□□□□□ -1.78
CHD2-219ENST00000630016 ADAMTSL1Q8N6G6 1762 aa3.93□□□□□ -1.78
CHD2-219ENST00000630016 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.92□□□□□ -1.78
CHD2-219ENST00000630016 NPHP1O15259 732 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 CD3EAPO15446 510 aaKnown RBP3.92□□□□□ -1.78
CHD2-219ENST00000630016 SLC28A2O43868 658 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 USP12O75317 370 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 NGFRP08138 427 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 ALDH7A1P49419 539 aaKnown RBP3.92□□□□□ -1.78
CHD2-219ENST00000630016 TXNL4AP83876 142 aaKnown RBP3.92□□□□□ -1.78
CHD2-219ENST00000630016 EIF4A2Q14240 407 aaKnown RBP3.92□□□□□ -1.78
CHD2-219ENST00000630016 ASIC2Q16515 512 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 ATAT1Q5SQI0 421 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 B4GALNT4Q76KP1 1039 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 DAAM2Q86T65 1068 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 FMNL3Q8IVF7 1028 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 TTC5Q8N0Z6 440 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 IGFBPL1Q8WX77 278 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 CHMP4CQ96CF2 233 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 WDYHV1Q96HA8 205 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 ZNF479Q96JC4 524 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 SCNM1Q9BWG6 230 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 DPH1Q9BZG8 443 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 NYXQ9GZU5 481 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 XPNPEP3Q9NQH7 507 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 DECR2Q9NUI1 292 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 ARL8BQ9NVJ2 186 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 TMEM45AQ9NWC5 275 aa3.92□□□□□ -1.78
CHD2-219ENST00000630016 MYH14Q7Z406 1995 aaKnown RBP3.92□□□□□ -1.78
CHD2-219ENST00000630016 RGPD2P0DJD1 1756 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 C2CD4BA6NLJ0 364 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 A8MVJ9 347 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 TMEM233B4DJY2 109 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 CCP110O43303 1012 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 CTIFO43310 598 aaKnown RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 AP1G1O43747 822 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 CELF2O95319 508 aaKnown RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 CD19P15391 556 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 PGGT1BP53609 377 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 KPNB1Q14974 876 aaKnown RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 ST3GAL2Q16842 350 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 CRY2Q49AN0 593 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 IFIT1BQ5T764 474 aaKnown RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 TBC1D9BQ66K14 1250 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 RGMBQ6NW40 437 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 PDXDC1Q6P996 788 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 FBXO46Q6PJ61 603 aaPredicted RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 RFX8Q6ZV50 586 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 NBPF5PQ86XG9 351 aaPredicted RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 DENND1CQ8IV53 801 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 TIAM2Q8IVF5 1701 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 PNPLA1Q8N8W4 532 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 SPSB4Q96A44 273 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 EDC3Q96F86 508 aaKnown RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 MEIS3Q99687 375 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 RTFDC1Q9BY42 306 aaPredicted RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 NUAK2Q9H093 628 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 USP29Q9HBJ7 922 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 DNMT3BQ9UBC3 853 aaKnown RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 NKX1-2Q9UD57 310 aaPredicted RBP3.91□□□□□ -1.78
CHD2-219ENST00000630016 TCEAL9Q9UHQ7 104 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 RNF123Q5XPI4 1314 aa3.91□□□□□ -1.78
CHD2-219ENST00000630016 ADAMTS7Q9UKP4 1686 aa3.9□□□□□ -1.78
CHD2-219ENST00000630016 CCDC88AQ3V6T2 1871 aa3.9□□□□□ -1.78
CHD2-219ENST00000630016 RIC1Q4ADV7 1423 aa3.9□□□□□ -1.78
CHD2-219ENST00000630016 A0A1W2PPC1 479 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 ERVV-1B6SEH8 477 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 F8W810 466 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 RNMTO43148 476 aaKnown RBP3.9□□□□□ -1.79
CHD2-219ENST00000630016 BBOX1O75936 387 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 PLAUP00749 431 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 KITP10721 976 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 ADRA1DP25100 572 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 RPS12P25398 132 aaKnown RBP3.9□□□□□ -1.79
CHD2-219ENST00000630016 MCM5P33992 734 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 TM4SF4P48230 202 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 PGDP52209 483 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 SLC12A2P55011 1212 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 ARHGEF6Q15052 776 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 ZNF790Q6PG37 636 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 FAM57BQ71RH2 274 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 DIS3LQ8TF46 1054 aaKnown RBP3.9□□□□□ -1.79
CHD2-219ENST00000630016 WIPF2Q8TF74 440 aaPredicted RBP3.9□□□□□ -1.79
CHD2-219ENST00000630016 TRMT61AQ96FX7 289 aaKnown RBP3.9□□□□□ -1.79
CHD2-219ENST00000630016 VPS50Q96JG6 964 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 CCDC136Q96JN2 1154 aa3.9□□□□□ -1.79
CHD2-219ENST00000630016 ZNF518BQ9C0D4 1074 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms