RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 TBC1D3Q8IZP1 549 aaPredicted RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 ARFGAP1Q8N6T3 406 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 EXD3Q8N9H8 876 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 SRFBP1Q8NEF9 429 aaKnown RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 OR52N4Q8NGI2 321 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 SCAMP5Q8TAC9 235 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 WDR60Q8WVS4 1066 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 IP6K1Q92551 441 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 KAT2AQ92830 837 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 ZFYVE19Q96K21 471 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 RMDN3Q96TC7 470 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 RTKNQ9BST9 563 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 MLXIPQ9HAP2 919 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 PAPOLBQ9NRJ5 636 aaKnown RBP2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 THSD1Q9NS62 852 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 GRHPRQ9UBQ7 328 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 UTS2RQ9UKP6 389 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 DAPP1Q9UN19 280 aa2.73□□□□□ -1.97
SCARNA4-201ENST00000629045 SPATA31A5Q5VU36 1347 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 SPATA31A7Q8IWB4 1347 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 C3orf70A6NLC5 250 aaPredicted RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ZNF814B7Z6K7 855 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 H3BNX3 289 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 RHODO00212 210 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 TLX3O43711 291 aaPredicted RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 NDUFB8O95169 186 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 NTN1O95631 604 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 CYP21A2P08686 494 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 FGF2P09038 288 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 IGFBP2P18065 325 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 TGM2P21980 687 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 SERPINF1P36955 418 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ME1P48163 572 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 RHBDL3P58872 404 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ICA1Q05084 483 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 SMTNL2Q2TAL5 461 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 GALNTL6Q49A17 601 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ASPHD1Q5U4P2 390 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 PGBD2Q6P3X8 592 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 SYNE3Q6ZMZ3 975 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 B4GALNT4Q76KP1 1039 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 RTL10Q7L3V2 364 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 RRAGAQ7L523 313 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 UBE2Q1Q7Z7E8 422 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 DDIASQ8IXT1 998 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 MSI2Q96DH6 328 aaKnown RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 TMEM79Q9BSE2 394 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 TMEM120AQ9BXJ8 343 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ARHGAP39Q9C0H5 1083 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ELAC1Q9H777 363 aaKnown RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 ERVK-5Q9HDB9 667 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 SEMA4BQ9NPR2 832 aaPredicted RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 PRDM8Q9NQV8 689 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 DACT1Q9NYF0 836 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 IPO11Q9UI26 975 aaKnown RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 AGO2Q9UKV8 859 aaKnown RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 NFU1Q9UMS0 254 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 RCE1Q9Y256 329 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 HS3ST3B1Q9Y662 390 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 COPG1Q9Y678 874 aaKnown RBP2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 SQORQ9Y6N5 450 aa2.72□□□□□ -1.97
SCARNA4-201ENST00000629045 KIR2DS5A0A0G2JLQ3 304 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TMEM272A0A1B0GTI8 110 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 KIR2DS3K7RE56 304 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 USP12O75317 370 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 EPN2O95208 641 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 NFATC1O95644 943 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TOMM40O96008 361 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CSTBP04080 98 aaKnown RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 ITGA2BP08514 1039 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CYP3A4P08684 503 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TMEM191BP0C7N4 346 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CHRNB1P11230 501 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CIITAP33076 1130 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 RCAN1P53805 252 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 RBM6P78332 1123 aaKnown RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CHAF1AQ13111 956 aaPredicted RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 PDCLQ13371 301 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 LAMB3Q13751 1172 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 INPP5JQ15735 1006 aaPredicted RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TIGD6Q17RP2 521 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 LEXMQ3ZCV2 418 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TRIM60Q495X7 471 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 ZNF569Q5MCW4 686 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 C6orf10Q5SRN2 563 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TTC22Q5TAA0 569 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 ATPAF1Q5TC12 328 aaPredicted RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TTLL5Q6EMB2 1281 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 HMBOX1Q6NT76 420 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CCDC174Q6PII3 467 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 KLHL17Q6TDP4 642 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 RFX8Q6ZV50 586 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 MYLK4Q86YV6 388 aaPredicted RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 SLC44A2Q8IWA5 706 aaPredicted RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 CACNA2D3Q8IZS8 1091 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 MMP21Q8N119 569 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 PAQR4Q8N4S7 273 aaPredicted RBP2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 TMEM199Q8N511 208 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 C9orf106Q8NAJ2 232 aa2.71□□□□□ -1.98
SCARNA4-201ENST00000629045 SLC44A5Q8NCS7 719 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms