RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 PCDHGA2Q9Y5H1 932 aa8.06□□□□□ -1.12
NR1I3-235ENST00000628566 HS3ST4Q9Y661 456 aa8.06□□□□□ -1.12
NR1I3-235ENST00000628566 A0A087X0T9 212 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 H0Y858 1186 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 MYO1FO00160 1098 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CCP110O43303 1012 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PRPSAP2O60256 369 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 KLF8O95600 359 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 ADCY5O95622 1261 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 APBB3O95704 486 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 DLDP09622 509 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CISD3P0C7P0 127 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 FAM228BP0C875 321 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 SP9P0CG40 484 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 HOXB2P14652 356 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 HNRNPLP14866 589 aaKnown RBP eCLIP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 SLC6A4P31645 630 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 ADRA1BP35368 520 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 KIR2DL1P43626 348 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 RPS24P62847 133 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PITX1P78337 314 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 AUHQ13825 339 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 HADHQ16836 314 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 C15orf59Q2T9L4 293 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PPP1R15BQ5SWA1 713 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 FBXL22Q6P050 247 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 SERPINA13PQ6UXR4 307 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PSTKQ8IV42 348 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CCDC170Q8IYT3 715 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CCAR2Q8N163 923 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CFAP52Q8N1V2 620 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CCDC33Q8N5R6 958 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 ALLCQ8N6M5 410 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 TXNDC5Q8NBS9 432 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PRSS33Q8NF86 280 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CENPIQ92674 756 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PRICKLE1Q96MT3 831 aaPredicted RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PANX2Q96RD6 677 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 EPAS1Q99814 870 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 ZYG11BQ9C0D3 744 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 OSBPL2Q9H1P3 480 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 CATSPERBQ9H7T0 1116 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 FBRSQ9HAH7 460 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 ARHGAP20Q9P2F6 1191 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 PPARGC1AQ9UBK2 798 aaKnown RBP8.05□□□□□ -1.12
NR1I3-235ENST00000628566 OR12D3Q9UGF7 316 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 KIAA1549LQ6ZVL6 1849 aa8.05□□□□□ -1.12
NR1I3-235ENST00000628566 TCRBV5S1A1TA0A578 114 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 TMEM191CA6NGB0 347 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 PRRT4C9JH25 899 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 E9PAM4 449 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 DAPK3O43293 454 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 RNASEH1O60930 286 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SRGAP2O75044 1071 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 RHOCP08134 193 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 PLEKP08567 350 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 TFE3P19532 575 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 CDC25BP30305 580 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 HLA-FP30511 346 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 OR1E1P30953 314 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 PCK1P35558 622 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SSR1P43307 286 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 GALCP54803 685 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 HDAC4P56524 1084 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 GSDMDP57764 484 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 RPL7AP62424 266 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 KRT83P78385 493 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SATB1Q01826 763 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 NRG1Q02297 640 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 GFPT1Q06210 699 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SCAPQ12770 1279 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 TCF15Q12870 199 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SFSWAPQ12872 951 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 TBX2Q13207 712 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 CRY1Q16526 586 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 GEN1Q17RS7 908 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 FNDC3BQ53EP0 1204 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 USP39Q53GS9 565 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 ODF2Q5BJF6 829 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 MBLAC2Q68D91 279 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 NAIF1Q69YI7 327 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 RWDD4Q6NW29 188 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 ZNF783Q6ZMS7 281 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 BNIPLQ7Z465 357 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SETD3Q86TU7 594 aaPredicted RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 LONP2Q86WA8 852 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 GAS2L3Q86XJ1 694 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 TMTC1Q8IUR5 882 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 RHOT2Q8IXI1 618 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 PGBD3Q8N328 593 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 IL17RCQ8NAC3 791 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 KDM1BQ8NB78 822 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 TBC1D31Q96DN5 1066 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 FAM122AQ96E09 287 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 SPACA7Q96KW9 195 aa8.04□□□□□ -1.12
NR1I3-235ENST00000628566 CALR3Q96L12 384 aaKnown RBP8.04□□□□□ -1.12
NR1I3-235ENST00000628566 PRMT1Q99873 361 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms