RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SSR1P43307 286 aaKnown RBP15.21■□□□□ 0.03
PNKP-221ENST00000627317 CXCL12P48061 93 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 AMPD2Q01433 879 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 GAD2Q05329 585 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 DMWDQ09019 674 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 MPPE1Q53F39 396 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 MS4A13Q5J8X5 152 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 EFHC2Q5JST6 749 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 PIK3R6Q5UE93 754 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 RFWD3Q6PCD5 774 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 LGI2Q8N0V4 545 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 NIPA2Q8N8Q9 360 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 DDI1Q8WTU0 396 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 CD101Q93033 1021 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 NTAN1Q96AB6 310 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 SIK2Q9H0K1 926 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 MARK1Q9P0L2 795 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 EP300Q09472 2414 aaPredicted RBP15.2■□□□□ 0.02
PNKP-221ENST00000627317 RCCD1A6NED2 376 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 LRCH4O75427 683 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 MIPP30301 263 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 SLC6A4P31645 630 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 MAN1A1P33908 653 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 ADRA1BP35368 520 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 PCK1P35558 622 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 GGCXP38435 758 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 AIF1P55008 147 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 KIF5AQ12840 1032 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 MESDQ14696 234 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 TCEAL1Q15170 157 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 RABGAP1LQ5R372 815 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 ACBD5Q5T8D3 534 aaPredicted RBP15.2■□□□□ 0.02
PNKP-221ENST00000627317 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 C12orf40Q86WS4 652 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 PHTF2Q8N3S3 785 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 CCDC185Q8N715 623 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 HJURPQ8NCD3 748 aaPredicted RBP15.2■□□□□ 0.02
PNKP-221ENST00000627317 EXOC4Q96A65 974 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 TMA16Q96EY4 203 aaKnown RBP15.2■□□□□ 0.02
PNKP-221ENST00000627317 HAPLN3Q96S86 360 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 IRX2Q9BZI1 471 aaPredicted RBP15.2■□□□□ 0.02
PNKP-221ENST00000627317 EPC1Q9H2F5 836 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 ANLNQ9NQW6 1124 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 TMPRSS4Q9NRS4 437 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 PCSK1NQ9UHG2 260 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 ADGRG1Q9Y653 693 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 HS3ST4Q9Y661 456 aa15.2■□□□□ 0.02
PNKP-221ENST00000627317 FAM186AA6NE01 2351 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 I6L893 689 aaPredicted RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 PJA2O43164 708 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 RNF40O75150 1001 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 LMNAP02545 664 aaKnown RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 CCDC175P0C221 793 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 TYRP14679 529 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 EIF2DP41214 584 aaKnown RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 ARHGAP25P42331 645 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 NAP1L1P55209 391 aaKnown RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 SCAPQ12770 1279 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 AUHQ13825 339 aaKnown RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 FBXO43Q4G163 708 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 TTC39BQ5VTQ0 682 aaPredicted RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 DAB2IPQ5VWQ8 1189 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 LRRC31Q6UY01 552 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 SFTPA1Q8IWL2 248 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 ETFBKMTQ8IXQ9 262 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 ARFGAP1Q8N6T3 406 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 P2RY11Q96G91 374 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 RPRD1AQ96P16 312 aaPredicted RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 XPO6Q96QU8 1125 aaKnown RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 PPP1R9BQ96SB3 815 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 PRMT1Q99873 361 aaKnown RBP15.19■□□□□ 0.02
PNKP-221ENST00000627317 TSGA10Q9BZW7 698 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 LACRTQ9GZZ8 138 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 PLK2Q9NYY3 685 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 VANGL2Q9ULK5 521 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 USP18Q9UMW8 372 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 SNX10Q9Y5X0 201 aa15.19■□□□□ 0.02
PNKP-221ENST00000627317 MYOFQ9NZM1 2061 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 KIAA1549LQ6ZVL6 1849 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 ANTXRLA6NF34 631 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 BTNL10A8MVZ5 291 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 K7EQS6 105 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 GFRA2O00451 464 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 TBL1XO60907 577 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 PENKP01210 267 aaPredicted RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 GJC1P36383 396 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 SGSHP51688 502 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 HADHBP55084 474 aaKnown RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 RPS24P62847 133 aaKnown RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 CCDC117Q8IWD4 279 aaPredicted RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 NAT16Q8N8M0 369 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 PEBP4Q96S96 227 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 SNRNP25Q9BV90 132 aaKnown RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 ZWILCHQ9H900 591 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 DNAJC17Q9NVM6 304 aaKnown RBP15.18■□□□□ 0.02
PNKP-221ENST00000627317 POLR3BQ9NW08 1133 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms