RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 DCAF15Q66K64 600 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 STEAP4Q687X5 459 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 SLFN12LQ6IEE8 588 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 C16orf46Q6P387 395 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 TMEM270Q6UE05 265 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 EPGNQ6UW88 154 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 FRMD7Q6ZUT3 714 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 LDHDQ86WU2 507 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 CTAGE3PQ8IX95 158 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 NDUFAF2Q8N183 169 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 CPSF7Q8N684 471 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 TRIML2Q8N7C3 387 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 TERB1Q8NA31 727 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 REPS2Q8NFH8 660 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 TSPAN14Q8NG11 270 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 RIN3Q8TB24 985 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 DQX1Q8TE96 717 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 KBTBD7Q8WVZ9 684 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 PRPF31Q8WWY3 499 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 USP6NLQ92738 828 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 TOP1MTQ969P6 601 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 CNDP2Q96KP4 475 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 SIGLEC10Q96LC7 697 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNF597Q96LX8 424 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 MCEEQ96PE7 176 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 RANBP9Q96S59 729 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 SORT1Q99523 831 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 TRIM56Q9BRZ2 755 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 APOL6Q9BWW8 343 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 OXCT2Q9BYC2 517 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 SLC13A1Q9BZW2 595 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 FAM117AQ9C073 453 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 LHX5Q9H2C1 402 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 ZNF395Q9H8N7 513 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 IFT122Q9HBG6 1241 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 SLC38A10Q9HBR0 1119 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 APOBEC3GQ9HC16 384 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 AGO4Q9HCK5 861 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 MRPL40Q9NQ50 206 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 PDLIM7Q9NR12 457 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 HOMER2Q9NSB8 354 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 MOCS1Q9NZB8 636 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 ZC3H7BQ9UGR2 993 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 FAF1Q9UNN5 650 aaPredicted RBP4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 SLC8A2Q9UPR5 921 aa4.28□□□□□ -1.72
PTP4A1-205ENST00000626021 DYTNA2CJ06 578 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 HMX2A2RU54 273 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 TRIM64A6NGJ6 449 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 SLC15A5A6NIM6 579 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF487B1APH4 448 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 TMEM114B3SHH9 223 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 H2AFYO75367 372 aaKnown RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 LRCH4O75427 683 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 SERPINB7O75635 380 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 TOM1L1O75674 476 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 BCAS2O75934 225 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ATG7O95352 703 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ZBTB7AO95365 584 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 H6PDO95479 791 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 TRUB2O95900 331 aaKnown RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 TNNI1P19237 187 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 TGM2P21980 687 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ME2P23368 584 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 PSMA2P25787 234 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 MLH1P40692 756 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 OAZ1P54368 228 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 PRKAA2P54646 552 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 COG7P83436 770 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 RELAQ04206 551 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 BCL2A1Q16548 175 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF829Q3KNS6 432 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 CCDC153Q494R4 210 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ZBED5Q49AG3 693 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 XKR9Q5GH70 373 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 FAM102BQ5T8I3 360 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 XRRA1Q6P2D8 792 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 IYDQ6PHW0 289 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 DARS2Q6PI48 645 aaKnown RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ELMSAN1Q6PJG2 1045 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 MAVSQ7Z434 540 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 CAND1Q86VP6 1230 aaKnown RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 MCF2L2Q86YR7 1114 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 RFX6Q8HWS3 928 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 COLGALT2Q8IYK4 626 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 UNC5BQ8IZJ1 945 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 PGAM4Q8N0Y7 254 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ARFGAP1Q8N6T3 406 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 POU5F2Q8N7G0 328 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 CEP70Q8NHQ1 597 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 PPP1R14CQ8TAE6 165 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ZNF420Q8TAQ5 688 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ATP2A3Q93084 1043 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 BORCS5Q969J3 196 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 ISL2Q96A47 359 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 HSPBAP1Q96EW2 488 aa4.27□□□□□ -1.73
PTP4A1-205ENST00000626021 CNBD2Q96M20 576 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms