RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 LMLNQ96KR4 655 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 NUP58Q9BVL2 599 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 GPR174Q9BXC1 333 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 NAA15Q9BXJ9 866 aaKnown RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 DDIT4Q9NX09 232 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 TAB2Q9NYJ8 693 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 COX16Q9P0S2 106 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 KIAA1522Q9P206 1035 aaPredicted RBP11.22□□□□□ -0.61
SSBP4-215ENST00000625926 SUSD2Q9UGT4 822 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 FHOD1Q9Y613 1164 aa11.22□□□□□ -0.61
SSBP4-215ENST00000625926 F5H5T6 163 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 MOCS3O95396 460 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 IGLV3-19P01714 112 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 C7P10643 843 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 GNSP15586 552 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 CDH5P33151 784 aaPredicted RBP11.21□□□□□ -0.61
SSBP4-215ENST00000625926 NOS2P35228 1153 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 CSKP41240 450 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 MAPK8P45983 427 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 ZBTB16Q05516 673 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 UAP1L1Q3KQV9 507 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 PTPN20Q4JDL3 420 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 FSCBQ5H9T9 825 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 PITRM1Q5JRX3 1037 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
SSBP4-215ENST00000625926 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 SLC26A9Q7LBE3 791 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 ZNF366Q8N895 744 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 KDM1BQ8NB78 822 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
SSBP4-215ENST00000625926 VPS16Q9H269 839 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 CAPN10Q9HC96 672 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 PRSS16Q9NQE7 514 aa11.21□□□□□ -0.61
SSBP4-215ENST00000625926 RALYQ9UKM9 306 aaKnown RBP11.21□□□□□ -0.61
SSBP4-215ENST00000625926 INTS6Q9UL03 887 aaKnown RBP11.21□□□□□ -0.61
SSBP4-215ENST00000625926 SPTBN2O15020 2390 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF638Q14966 1978 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 METTL12A8MUP2 240 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 MEI4A8MW99 385 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 F8VZ95 297 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 M0QYT0 321 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 DAB1O75553 588 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 DNTTP04053 509 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 SRPRAP08240 638 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 MAOBP27338 520 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 MATKP42679 507 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 NOVA1P51513 510 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 NME3Q13232 169 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 SLC12A1Q13621 1099 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 KRT31Q15323 416 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 RABGAP1LQ5R372 815 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 FKBP15Q5T1M5 1219 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 TAF3Q5VWG9 929 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 MMS22LQ6ZRQ5 1243 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 ERICH1Q86X53 443 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 CACUL1Q86Y37 369 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 C18orf8Q96DM3 657 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 PRMT1Q99873 361 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 GTPBP2Q9BX10 602 aaKnown RBP11.2□□□□□ -0.62
SSBP4-215ENST00000625926 ANO10Q9NW15 660 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 FANCLQ9NW38 375 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 RRN3Q9NYV6 651 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.2□□□□□ -0.628e-11■□□□□ 10.7
SSBP4-215ENST00000625926 STAP1Q9ULZ2 295 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 ERVW-1Q9UQF0 538 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
SSBP4-215ENST00000625926 FRYLO94915 3013 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 RNASEH1O60930 286 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 LSM8O95777 96 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SYPP08247 313 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 CEACAM1P13688 526 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SCNN1AP37088 669 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 GABRB2P47870 512 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 OXCT1P55809 520 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 RNASE9P60153 205 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 RPS14P62263 151 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 ECT2LQ008S8 904 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SFSWAPQ12872 951 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 AUHQ13825 339 aaKnown RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 ARID5BQ14865 1188 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 PLEKHG6Q3KR16 790 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 TTC31Q49AM3 519 aaPredicted RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SH3PXD2AQ5TCZ1 1133 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 RNF219Q5W0B1 726 aaPredicted RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 ZNF776Q68DI1 518 aaPredicted RBP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 FBXL22Q6P050 247 aa11.19□□□□□ -0.62
SSBP4-215ENST00000625926 SND1Q7KZF4 910 aaKnown RBP eCLIP11.19□□□□□ -0.62
SSBP4-215ENST00000625926 NOP9Q86U38 636 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms