RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 RNASEH1O60930 286 aaKnown RBP14.48□□□□□ -0.09
SNX1-214ENST00000625244 TNFSF15O95150 251 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 GJB6O95452 261 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 PABPC1P11940 636 aaKnown RBP14.48□□□□□ -0.09
SNX1-214ENST00000625244 GAP43P17677 238 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 ADORA2BP29275 332 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 SLC8A1P32418 973 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 INHBCP55103 352 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 HMGN5P82970 282 aaKnown RBP14.48□□□□□ -0.09
SNX1-214ENST00000625244 SFSWAPQ12872 951 aaKnown RBP14.48□□□□□ -0.09
SNX1-214ENST00000625244 MPPE1Q53F39 396 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 SCARA5Q6ZMJ2 495 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 CLEC20AQ6ZU45 233 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 ZNF516Q92618 1163 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 HPS3Q969F9 1004 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 BACH2Q9BYV9 841 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 EPN3Q9H201 632 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 HMGXB4Q9UGU5 601 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 CA5BQ9Y2D0 317 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 PCDHA5Q9Y5H7 936 aa14.48□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3DA0A087WVF3 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3IA0A087WXS9 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3EA0A087X179 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3KA0A087X1G2 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3FA6NER0 549 aaPredicted RBP14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3LB9A6J9 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 NOBOXO60393 691 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 MAGEC1O60732 1142 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 PPFIA2O75334 1257 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 ATP5BP06576 529 aaKnown RBP14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3HP0C7X1 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 FAM200BP0CF97 657 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 RALAP11233 206 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 GOT1P17174 413 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 MAT2AP31153 395 aaKnown RBP14.47□□□□□ -0.09
SNX1-214ENST00000625244 CD70P32970 193 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 PSEN1P49768 467 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 KIF11P52732 1056 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 FOXK1P85037 733 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TRPC3Q13507 836 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TGIF1Q15583 401 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBR1Q16650 682 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 C9orf64Q5T6V5 341 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3GQ6DHY5 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3CQ6IPX1 549 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 PTRH1Q86Y79 214 aaKnown RBP14.47□□□□□ -0.09
SNX1-214ENST00000625244 TBC1D3Q8IZP1 549 aaPredicted RBP14.47□□□□□ -0.09
SNX1-214ENST00000625244 ARL14Q8N4G2 192 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 FAM26EQ8N5C1 309 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 RDH13Q8NBN7 331 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 IFI44Q8TCB0 444 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 WFDC5Q8TCV5 224 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 CCDC127Q96BQ5 260 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 CGRRF1Q99675 332 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 SLC25A18Q9H1K4 315 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 OLFML3Q9NRN5 406 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 CLIC5Q9NZA1 410 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 KIF3AQ9Y496 699 aa14.47□□□□□ -0.09
SNX1-214ENST00000625244 COL27A1Q8IZC6 1860 aaPredicted RBP14.46□□□□□ -0.09
SNX1-214ENST00000625244 ITPR3Q14573 2671 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 SLC12A8A0AV02 714 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 THEGLP0DJG4 465 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.09
SNX1-214ENST00000625244 ATICP31939 592 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 PSMD8P48556 350 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 SGSHP51688 502 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 OVGP1Q12889 678 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 SKIDA1Q1XH10 827 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 HNRNPA1L2Q32P51 320 aaKnown RBP14.46□□□□□ -0.09
SNX1-214ENST00000625244 MCTP1Q6DN14 999 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 SND1Q7KZF4 910 aaKnown RBP eCLIP14.46□□□□□ -0.09
SNX1-214ENST00000625244 CCDC186Q7Z3E2 898 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.09
SNX1-214ENST00000625244 CRYBG2Q8N1P7 616 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 SYAP1Q96A49 352 aaPredicted RBP14.46□□□□□ -0.09
SNX1-214ENST00000625244 ARRDC3Q96B67 414 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 MARCH2Q9P0N8 246 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 TPX2Q9ULW0 747 aaKnown RBP14.46□□□□□ -0.09
SNX1-214ENST00000625244 LIMCH1Q9UPQ0 1083 aa14.46□□□□□ -0.09
SNX1-214ENST00000625244 AFMP43652 599 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 ALCAMQ13740 583 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 STAT4Q14765 748 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 CLCA4Q14CN2 919 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 PSMD6Q15008 389 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 SNRNP35Q16560 246 aaKnown RBP14.45□□□□□ -0.1
SNX1-214ENST00000625244 BMT2Q1RMZ1 405 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 POM121L1PQ3SYA9 428 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 TMA16Q96EY4 203 aaKnown RBP14.45□□□□□ -0.1
SNX1-214ENST00000625244 MRGPRX3Q96LB0 322 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 CDK5RAP1Q96SZ6 601 aaKnown RBP14.45□□□□□ -0.1
SNX1-214ENST00000625244 FAM129BQ96TA1 746 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 VRTNQ9H8Y1 702 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 LRRC4CQ9HCJ2 640 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 CYTH4Q9UIA0 394 aa14.45□□□□□ -0.1
SNX1-214ENST00000625244 ZFHX3Q15911 3703 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 POLQO75417 2590 aa14.44□□□□□ -0.1
SNX1-214ENST00000625244 CASC3O15234 703 aaKnown RBP14.44□□□□□ -0.1
SNX1-214ENST00000625244 PIAS2O75928 621 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms