RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 NETO1Q8TDF5 533 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 C1orf74Q96LT6 269 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 EDEM3Q9BZQ6 932 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CIPCQ9C0C6 399 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 RETREG1Q9H6L5 497 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 NLRC4Q9NPP4 1024 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 KIAA1522Q9P206 1035 aaPredicted RBP12.87□□□□□ -0.35
LINC00963-217ENST00000624009 TMEM59LQ9UK28 342 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
LINC00963-217ENST00000624009 CHD8Q9HCK8 2581 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 A0A1B0GTH6 734 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 M0QYT0 321 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 GRAP2O75791 330 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 ENDOD1O94919 500 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 MOCS2O96007 188 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 CALB1P05937 261 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 SRPRAP08240 638 aaKnown RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 FERP16591 822 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 CHRNB2P17787 502 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 OXTRP30559 389 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PLK1P53350 603 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 RPS24P62847 133 aaKnown RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 SULT2A1Q06520 285 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PTPRNQ16849 979 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 FUT11Q495W5 492 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 TAF3Q5VWG9 929 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PEAR1Q5VY43 1037 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 NAA35Q5VZE5 725 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 SERPINA13PQ6UXR4 307 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 RABEPKQ7Z6M1 372 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 CHSY1Q86X52 802 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PHF13Q86YI8 300 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 LGI2Q8N0V4 545 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PGBD3Q8N328 593 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 OR2T3Q8NH03 318 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 RNF34Q969K3 372 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 RTKNQ9BST9 563 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 PCED1AQ9H1Q7 454 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 WDCPQ9H6R7 721 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 ZDHHC4Q9NPG8 344 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 USP36Q9P275 1121 aaKnown RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 SUN2Q9UH99 717 aa12.86□□□□□ -0.35
LINC00963-217ENST00000624009 EVLQ9UI08 416 aaPredicted RBP12.86□□□□□ -0.35
LINC00963-217ENST00000624009 IGHV1OR15-9A0A0B4J2B8 117 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 WASH3PC4AMC7 463 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 DCLK1O15075 740 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 CLDN11O75508 207 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 EPHX1P07099 455 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 BCKDHBP21953 392 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 CD70P32970 193 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 NSFP46459 744 aaKnown RBP12.85□□□□□ -0.35
LINC00963-217ENST00000624009 TPM4P67936 248 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 LMAN2Q12907 356 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 PLEKHG6Q3KR16 790 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 FIGNQ5HY92 759 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 OTUD1Q5VV17 481 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-217ENST00000624009 RAP1GAP2Q684P5 730 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 FBXL22Q6P050 247 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 WFDC5Q8TCV5 224 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 SLC20A1Q8WUM9 679 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 CPA5Q8WXQ8 436 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 FOXJ1Q92949 421 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 RMDN1Q96DB5 314 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 HAPLN3Q96S86 360 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 MKRN2Q9H000 416 aaKnown RBP12.85□□□□□ -0.35
LINC00963-217ENST00000624009 PRDM16Q9HAZ2 1276 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 ITM2CQ9NQX7 267 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 XPO7Q9UIA9 1087 aaKnown RBP12.85□□□□□ -0.35
LINC00963-217ENST00000624009 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
LINC00963-217ENST00000624009 SCML1Q9UN30 329 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 ITIH6Q6UXX5 1313 aa12.85□□□□□ -0.35
LINC00963-217ENST00000624009 CXorf51AA0A1B0GTR3 108 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 H0Y626 953 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 SLC30A4O14863 429 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 MAP3K13O43283 966 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 PAGE1O75459 146 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 PRKCHP24723 683 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 FLT3P36888 993 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CSKP41240 450 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 WASP42768 502 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 PTPN9P43378 593 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 COPAP53621 1224 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CDH4P55283 916 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 ST8SIA6P61647 398 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 NRG1Q02297 640 aaPredicted RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CREB5Q02930 508 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 SFSWAPQ12872 951 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 NME3Q13232 169 aa12.84□□□□□ -0.35
LINC00963-217ENST00000624009 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
LINC00963-217ENST00000624009 CLEC16AQ2KHT3 1053 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms