RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PNMA5Q96PV4 448 aa9.1□□□□□ -0.95
VCL-206ENST00000623461 TEX13BQ9BXU2 312 aa9.1□□□□□ -0.95
VCL-206ENST00000623461 RIBC2Q9H4K1 309 aa9.1□□□□□ -0.95
VCL-206ENST00000623461 DHX33Q9H6R0 707 aaKnown RBP9.1□□□□□ -0.95
VCL-206ENST00000623461 DBNDD1Q9H9R9 158 aa9.1□□□□□ -0.95
VCL-206ENST00000623461 LIMD1Q9UGP4 676 aa9.1□□□□□ -0.95
VCL-206ENST00000623461 RECQL5O94762 991 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 GRIA3P42263 894 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 RNF19BQ6ZMZ0 732 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 TBC1D16Q8TBP0 767 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 EPB41L1Q9H4G0 881 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 TSR3Q9UJK0 312 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 CCNKO75909 580 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 WARSP23381 471 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 FLT3P36888 993 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 ANXA11P50995 505 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 PCSK7Q16549 785 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 XPNPEP3Q9NQH7 507 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 TRIM17Q9Y577 477 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 PPRC1Q5VV67 1664 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 FAM205AQ6ZU69 1335 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 MOCS2O96007 188 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 C6orf222P0C671 652 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 SPIDRQ14159 915 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 MFSD7Q6UXD7 560 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 CBWD2Q8IUF1 395 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 SEPT12Q8IYM1 358 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 LEMD2Q8NC56 503 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 L3MBTL3Q96JM7 780 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 FRMPD4Q14CM0 1322 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 F8W810 466 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 PIGNO95427 931 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 FECHP22830 423 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 CD151P48509 253 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 ADAM17P78536 824 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 CSHL1Q14406 222 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 INO80DQ53TQ3 878 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 ISLR2Q6UXK2 745 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 DPP9Q86TI2 863 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 SATL1Q86VE3 508 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 PNPT1Q8TCS8 783 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 RGS18Q9NS28 235 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 USP20Q9Y2K6 914 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 GSTK1Q9Y2Q3 226 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 SNX9Q9Y5X1 595 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 TRAFD1O14545 582 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 NPR3P17342 541 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 ANGPT1Q15389 498 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 DCAF6Q58WW2 860 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 SCN4BQ8IWT1 228 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 CELF1Q92879 486 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 C7orf26Q96N11 449 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 RAP2CQ9Y3L5 183 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 WDR27A2RRH5 827 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 VPS26AO75436 327 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 KHDC1Q4VXA5 237 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 SNRNP48Q6IEG0 339 aaKnown RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 KRT74Q7RTS7 529 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 SLCO6A1Q86UG4 719 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 KCNMB4Q86W47 210 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 PROSER1Q86XN7 944 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 FBXO6Q9NRD1 293 aaPredicted RBP9.09□□□□□ -0.95
VCL-206ENST00000623461 FAM49BQ9NUQ9 324 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 GNPTGQ9UJJ9 305 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 VAV3Q9UKW4 847 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 MKL2Q9ULH7 1088 aa9.09□□□□□ -0.95
VCL-206ENST00000623461 TPP1O14773 563 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 KLRC4O43908 158 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 ALOX15P16050 662 aaPredicted RBP9.08□□□□□ -0.96
VCL-206ENST00000623461 SREBF1P36956 1147 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 MAGEA8P43361 318 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 STAT5BP51692 787 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 VPS72Q15906 364 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 FOPNLQ96NB1 174 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 KLHL32Q96NJ5 620 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 WWOXQ9NZC7 414 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 CHKBQ9Y259 395 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 ASTN2O75129 1339 aaPredicted RBP9.08□□□□□ -0.96
VCL-206ENST00000623461 AGLP35573 1532 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 CHRM3P20309 590 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 TTLL9Q3SXZ7 439 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 PLA2G4FQ68DD2 849 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 EEPD1Q7L9B9 569 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 PCDH20Q8N6Y1 951 aaKnown RBP9.08□□□□□ -0.96
VCL-206ENST00000623461 LRRC17Q8N6Y2 441 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 TJP2Q9UDY2 1190 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 CDH22Q9UJ99 828 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 NUDT5Q9UKK9 219 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 APBA3O96018 575 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 MLNP12872 115 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 CCNB1P14635 433 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 RBM15BQ8NDT2 890 aaKnown RBP9.08□□□□□ -0.96
VCL-206ENST00000623461 FAM172AQ8WUF8 416 aa9.08□□□□□ -0.96
VCL-206ENST00000623461 CBWD1Q9BRT8 395 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms