RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MAGEB16A2A368 324 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 FAM72CH0Y354 149 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 PAGE1O75459 146 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 KRT37O76014 449 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 SUN1O94901 812 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 ZWINTO95229 277 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 OR4Q2P0C623 313 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 SRGAP2BP0DMP2 458 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 SERPINB9P50453 376 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 WASHC5Q12768 1159 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 MTFR1Q15390 333 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 TEX44Q53QW1 395 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 FAM72AQ5TYM5 149 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 MANEALQ5VSG8 457 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 FAM72DQ6L9T8 149 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 CPLX4Q7Z7G2 160 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 LINC00523Q86TU6 105 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 SLC26A11Q86WA9 606 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 LRRC6Q86X45 466 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 FAM72BQ86X60 149 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 SLC44A1Q8WWI5 657 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 FBXO32Q969P5 355 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 SLC39A13Q96H72 371 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 BTN2A3PQ96KV6 586 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 TRABDQ9H4I3 376 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 HAUS2Q9NVX0 235 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 MTRRQ9UBK8 725 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 TBK1Q9UHD2 729 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
LDB3-208ENST00000623007 AAR2Q9Y312 384 aaKnown RBP16.79■□□□□ 0.28
LDB3-208ENST00000623007 MAP3K6O95382 1288 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 PTPN3P26045 913 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 GCAP28676 217 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 MLLT6P55198 1093 aaPredicted RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 TBX4P57082 545 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TLE2Q04725 743 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 FRG1Q14331 258 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 TRIP4Q15650 581 aaPredicted RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 MGAT5BQ3V5L5 792 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TPGS2Q68CL5 300 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TTC19Q6DKK2 380 aaPredicted RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 ZNF567Q8N184 647 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 ANKS4BQ8N8V4 417 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 ZNF473Q8WTR7 871 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 CASP10Q92851 521 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TTC17Q96AE7 1141 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 STAMBPL1Q96FJ0 436 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 FCRL2Q96LA5 508 aaPredicted RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 TTLL2Q9BWV7 592 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 GBA3Q9H227 469 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 PCDHA11Q9Y5I1 949 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 VWA8A3KMH1 1905 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 MICAL3Q7RTP6 2002 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TM9SF1O15321 606 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 KRT38O76015 456 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 AP2A1O95782 977 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 AMHP03971 560 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 PPP3CCP48454 512 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 NDST2P52849 883 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 RABGGTBP53611 331 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 DNAJC3Q13217 504 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 PKN2Q16513 984 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 DDR2Q16832 855 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TTC39BQ5VTQ0 682 aaPredicted RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 RWDD4Q6NW29 188 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 ATPAF2Q8N5M1 289 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 GRAMD1AQ96CP6 724 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 SIGLEC10Q96LC7 697 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 MAGEB18Q96M61 343 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 PLCD4Q9BRC7 762 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 MAGEB5Q9BZ81 275 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 LRRC40Q9H9A6 602 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 TMEM39AQ9NV64 488 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
LDB3-208ENST00000623007 HBS1LQ9Y450 684 aaKnown RBP16.78■□□□□ 0.28
LDB3-208ENST00000623007 PCNTO95613 3336 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 EFEMP2O95967 443 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 CLTBP09497 229 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 PGAM1P18669 254 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 CCL23P55773 120 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 CREMQ03060 361 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 GAD2Q05329 585 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 SPARCL1Q14515 664 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 SEPT7Q16181 437 aaKnown RBP16.77■□□□□ 0.28
LDB3-208ENST00000623007 TRIM60Q495X7 471 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 HP1BP3Q5SSJ5 553 aaPredicted RBP16.77■□□□□ 0.28
LDB3-208ENST00000623007 STEAP4Q687X5 459 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 NAPEPLDQ6IQ20 393 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 YTHDF3Q7Z739 585 aaKnown RBP16.77■□□□□ 0.28
LDB3-208ENST00000623007 RNF168Q8IYW5 571 aaPredicted RBP16.77■□□□□ 0.28
LDB3-208ENST00000623007 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.28
LDB3-208ENST00000623007 RTL3Q8N8U3 475 aaKnown RBP16.77■□□□□ 0.28
LDB3-208ENST00000623007 FBXO22Q8NEZ5 403 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 SCLYQ96I15 445 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 TEKT5Q96M29 485 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 ANLNQ9NQW6 1124 aa16.77■□□□□ 0.28
LDB3-208ENST00000623007 TMPRSS4Q9NRS4 437 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms