RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 ABHD2P08910 425 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 RPL17P18621 184 aaKnown RBP19■□□□□ 0.63
PCDHB2-202ENST00000622947 ARL4CP56559 192 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 CCDC38Q502W7 563 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 EURLQ9NYK6 297 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 CPSF2Q9P2I0 782 aaKnown RBP19■□□□□ 0.63
PCDHB2-202ENST00000622947 C15orf41Q9Y2V0 281 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 CDY1Q9Y6F8 540 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 TCEA3O75764 348 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 CLTBP09497 229 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 SSTR1P30872 391 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 GJA8P48165 433 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 DEFB103AP81534 67 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 DUSP4Q13115 394 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 HEATR6Q6AI08 1181 aaKnown RBP19■□□□□ 0.63
PCDHB2-202ENST00000622947 MON1AQ86VX9 555 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 RNF34Q969K3 372 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 P2RY11Q96G91 374 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 FAM210AQ96ND0 272 aa19■□□□□ 0.63
PCDHB2-202ENST00000622947 MRPL42Q9Y6G3 142 aaKnown RBP19■□□□□ 0.63
PCDHB2-202ENST00000622947 FAM92AA1XBS5 289 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 TRIM43BA6NCK2 446 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 F5H423 210 aaPredicted RBP18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 NDC80O14777 642 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 PIAS1O75925 651 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 CREB1P16220 341 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 PEX19P40855 299 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 MAGEA6P43360 314 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 ALDH7A1P49419 539 aaKnown RBP18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 AP1B1Q10567 949 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 BBS9Q3SYG4 887 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 CEP128Q6ZU80 1094 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 CAND1Q86VP6 1230 aaKnown RBP18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 RNF168Q8IYW5 571 aaPredicted RBP18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 FBXO36Q8NEA4 188 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 TRIM43Q96BQ3 446 aaPredicted RBP18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 TBC1D31Q96DN5 1066 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 STAMBPL1Q96FJ0 436 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 SERPINB12Q96P63 405 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 SEPT5Q99719 369 aaPredicted RBP18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 SIK2Q9H0K1 926 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 PRDM16Q9HAZ2 1276 aa18.99■□□□□ 0.63
PCDHB2-202ENST00000622947 WDR27A2RRH5 827 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 HACD1B0YJ81 288 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 PAGE1O75459 146 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 TBX18O95935 607 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 APRTP07741 180 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 EPHB2P29323 1055 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 WASHC5Q12768 1159 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ELAVL2Q12926 359 aaKnown RBP18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 RIPK1Q13546 671 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 MGAT5BQ3V5L5 792 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ANKRD20A2Q5SQ80 823 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ANKRD20A1Q5TYW2 823 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ANKRD20A3Q5VUR7 823 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 FAM117BQ6P1L5 589 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ANKS3Q6ZW76 656 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ZNF534Q76KX8 674 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 MDM1Q8TC05 714 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 CCT6BQ92526 530 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 TOP1MTQ969P6 601 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 ARMC5Q96C12 935 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 TRIM62Q9BVG3 475 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 PHACTR1Q9C0D0 580 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 OSBPL2Q9H1P3 480 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 BAIAP2L1Q9UHR4 511 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 SMNDC1O75940 238 aaKnown RBP eCLIP18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 AGTP01019 485 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 CSF2RAP15509 400 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 GRIA1P42261 906 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 GLUD2P49448 558 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 RASIP1Q5U651 963 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 FBXO46Q6PJ61 603 aaPredicted RBP18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 DENND5BQ6ZUT9 1274 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 EXOC3L1Q86VI1 746 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 PDIK1LQ8N165 341 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 CCNYQ8ND76 341 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 FBXO22Q8NEZ5 403 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 PYROXD1Q8WU10 500 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 DEPDC1BQ8WUY9 529 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 IGSF21Q96ID5 467 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 TTC25Q96NG3 672 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 KLC2Q9H0B6 622 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 FBXO44Q9H4M3 255 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 VPS37BQ9H9H4 285 aa18.98■□□□□ 0.63
PCDHB2-202ENST00000622947 KCNU1A8MYU2 1149 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 SMAPO00193 183 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 SRGAP2BP0DMP2 458 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 HAPLN1P10915 354 aaPredicted RBP18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 ATF6P18850 670 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 STAT4Q14765 748 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 QPCTQ16769 361 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 SPPL2BQ8TCT7 592 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 ZNF689Q96CS4 500 aaPredicted RBP18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 THOC1Q96FV9 657 aaKnown RBP18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 EPAS1Q99814 870 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 RC3H2Q9HBD1 1191 aaKnown RBP18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 TBK1Q9UHD2 729 aa18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 CORO1CQ9ULV4 474 aaPredicted RBP18.97■□□□□ 0.63
PCDHB2-202ENST00000622947 CHMP2BQ9UQN3 213 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms