RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 TRPV5Q9NQA5 729 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 HEBP1Q9NRV9 189 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 KLHL11Q9NVR0 708 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 VANGL2Q9ULK5 521 aa20.47■□□□□ 0.87
PDLIM2-221ENST00000622702 LRRD1A4D1F6 860 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 C3orf70A6NLC5 250 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 DRGXA6NNA5 263 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 ZNF487B1APH4 448 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 E9PAM4 449 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 ENC1O14682 589 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 TUBB4AP04350 444 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 HOXC13P31276 330 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 DPYSL3Q14195 570 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 KRT81Q14533 505 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 RCOR2Q8IZ40 523 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 LGI2Q8N0V4 545 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 CSGALNACT1Q8TDX6 532 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 RBM41Q96IZ5 413 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 C16orf45Q96MC5 204 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 PRICKLE1Q96MT3 831 aaPredicted RBP20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 ZNF670Q9BS34 389 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 MFSD1Q9H3U5 465 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 PPARGC1AQ9UBK2 798 aaKnown RBP20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 NEU3Q9UQ49 428 aa20.46■□□□□ 0.87
PDLIM2-221ENST00000622702 PRR33A8MZF0 331 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 H3BRJ5 948 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 CREB3O43889 395 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 ATP1A1P05023 1023 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 CD48P09326 243 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 IL4RP24394 825 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 ARL4AP40617 200 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 TNK2Q07912 1038 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 MLF2Q15773 248 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 TAZQ16635 292 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 ODF2Q5BJF6 829 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 TRIM68Q6AZZ1 485 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 BMP8AQ7Z5Y6 402 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 FAF2Q96CS3 445 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 TBC1D31Q96DN5 1066 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 MYEOVQ96EZ4 313 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 RPRD1AQ96P16 312 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 NAPGQ99747 312 aaPredicted RBP20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 LRFN3Q9BTN0 628 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 CARD9Q9H257 536 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 SPHK2Q9NRA0 654 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 CWC15Q9P013 229 aaKnown RBP20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 COL4A2P08572 1712 aa20.45■□□□□ 0.86
PDLIM2-221ENST00000622702 COL4A3Q01955 1670 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 KIF2AO00139 706 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 EEF2KO00418 725 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 FANCGO15287 622 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 SRGAP2O75044 1071 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 GOT1P17174 413 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 DNA2P51530 1060 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 VCPP55072 806 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 TPI1P60174 286 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 COPS2P61201 443 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 MPPE1Q53F39 396 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 RABGAP1LQ5R372 815 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 MPP7Q5T2T1 576 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 TTC39BQ5VTQ0 682 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 DCAF12L1Q5VU92 463 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 RFX8Q6ZV50 586 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 HJURPQ8NCD3 748 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 TTC8Q8TAM2 541 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 ATP2A3Q93084 1043 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 IGSF8Q969P0 613 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 RNF25Q96BH1 459 aaPredicted RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 TMA16Q96EY4 203 aaKnown RBP20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 CSPG4P5Q96PW8 444 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 CALN1Q9BXU9 219 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 EBF3Q9H4W6 596 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 RETREG1Q9H6L5 497 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 GTSE1Q9NYZ3 720 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 MARK1Q9P0L2 795 aa20.44■□□□□ 0.86
PDLIM2-221ENST00000622702 CTAGE9A4FU28 777 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 ESPNB1AK53 854 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 STK25O00506 426 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 TRDMT1O14717 391 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 NFATC1O95644 943 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 EPHB2P29323 1055 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 CDKN2BP42772 138 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 PRKCQQ04759 706 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 RNF43Q68DV7 783 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 RHBDF2Q6PJF5 856 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 MFSD7Q6UXD7 560 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 SPOCD1Q6ZMY3 1216 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 TMEM25Q86YD3 366 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 FLCNQ8NFG4 579 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 SHDQ96IW2 340 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 ZYG11BQ9C0D3 744 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 HPS4Q9NQG7 708 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 DNAI1Q9UI46 699 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 TYW5A2RUC4 315 aaKnown RBP20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 KCNK3O14649 394 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 FGF10O15520 208 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 TSPAN3O60637 253 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 PENKP01210 267 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 CYBBP04839 570 aa20.43■□□□□ 0.86
PDLIM2-221ENST00000622702 CYP17A1P05093 508 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms