RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 NCBP2-AS2Q69YL0 99 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 TMCO3Q6UWJ1 677 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 NPNTQ6UXI9 565 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 KLHL7Q8IXQ5 586 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 TTC13Q8NBP0 860 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 IGSF8Q969P0 613 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 GDE1Q9NZC3 331 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 MPP6Q9NZW5 540 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 PPARGC1AQ9UBK2 798 aaKnown RBP18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 STOML2Q9UJZ1 356 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 HEY1Q9Y5J3 304 aa18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 V9GYY5 206 aaPredicted RBP18.36■□□□□ 0.53
PTCHD3-202ENST00000622555 IGLV3-10A0A075B6K4 115 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 E2F8A0AVK6 867 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 PECAM1P16284 738 aaPredicted RBP18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 WEE1P30291 646 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 IRAK1P51617 712 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 USP4Q13107 963 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 ZNF77Q15935 545 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 FAM78AQ5JUQ0 283 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 BBS7Q8IWZ6 715 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 SMRP1Q8NCR6 262 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 ACTL9Q8TC94 416 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 P3H4Q92791 437 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 MAGOHBQ96A72 148 aaKnown RBP18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 MYEOVQ96EZ4 313 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 ZYG11BQ9C0D3 744 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 DDX47Q9H0S4 455 aaKnown RBP18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 KIF9Q9HAQ2 790 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 HOMER3Q9NSC5 361 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 CD207Q9UJ71 328 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 CDH7Q9ULB5 785 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 TSPAN3O60637 253 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 PHF2O75151 1096 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 FOSL2P15408 326 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 SNX1Q13596 522 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 HABP4Q5JVS0 413 aaKnown RBP18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 RABGAP1LQ5R372 815 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 DEFB123Q8N688 67 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 CELF5Q8N6W0 485 aaKnown RBP18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 RIN3Q8TB24 985 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 SMARCD2Q92925 531 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 ASB16Q96NS5 453 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 KRT12Q99456 494 aa18.35■□□□□ 0.53
PTCHD3-202ENST00000622555 DRGXA6NNA5 263 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 H3BQ06 376 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 MFSD11O43934 449 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 CNTN5O94779 1100 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 TCF3P15923 654 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 H2AFXP16104 143 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 RHOQP17081 205 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 VCPP55072 806 aaKnown RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 GBE1Q04446 702 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 PAFAH1B3Q15102 231 aaKnown RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 SKIV2LQ15477 1246 aaKnown RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 CCNG2Q16589 344 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 CYP1B1Q16678 543 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 ALFQ53S48 1182 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 CIR1Q86X95 450 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 CFAP52Q8N1V2 620 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 RTL3Q8N8U3 475 aaKnown RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 C12orf50Q8NA57 414 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 NOA1Q8NC60 698 aaKnown RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 PRICKLE1Q96MT3 831 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 GUCD1Q96NT3 240 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 POMKQ9H5K3 350 aa18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 ZFP37Q9Y6Q3 630 aaPredicted RBP18.34■□□□□ 0.53
PTCHD3-202ENST00000622555 MAP3K6O95382 1288 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 CHRNA3P32297 505 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 GBP2P32456 591 aaPredicted RBP18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 SERPINB6P35237 376 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 VIPR2P41587 438 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 RPS24P62847 133 aaKnown RBP18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 NOMO1Q15155 1222 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 C5orf22Q49AR2 442 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 TFAP2DQ7Z6R9 452 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 FAM217AQ8IXS0 508 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 PPM1EQ8WY54 764 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 UBXN4Q92575 508 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 NECTIN4Q96NY8 510 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 MYADMQ96S97 322 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 FRMD8P1Q9BZ68 369 aaPredicted RBP18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 LRRC19Q9H756 370 aa18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 USP15Q9Y4E8 981 aaPredicted RBP18.33■□□□□ 0.52
PTCHD3-202ENST00000622555 MCF2LO15068 1137 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 LIASO43766 372 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 CHKAP35790 457 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 NR2C2P49116 596 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 SGSHP51688 502 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 EIF3EP60228 445 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 SLC10A2Q12908 348 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 NLRP14Q86W24 1093 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 CPXM2Q8N436 756 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 MMGT1Q8N4V1 131 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 CCDC33Q8N5R6 958 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 NPWQ8N729 165 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 TDRD5Q8NAT2 981 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 NETO2Q8NC67 525 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms