RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 TTC21BQ7Z4L5 1316 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 FOXN3O00409 490 aaPredicted RBP5.8□□□□□ -1.48
VPS29-212ENST00000621131 PPM1GO15355 546 aaPredicted RBP5.8□□□□□ -1.48
VPS29-212ENST00000621131 IL18RAPO95256 599 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 PBX1P40424 430 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 ME1P48163 572 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 TFAP2DQ7Z6R9 452 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 TIFAQ96CG3 184 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 TRMOQ9BU70 441 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 GATA5Q9BWX5 397 aaPredicted RBP5.8□□□□□ -1.48
VPS29-212ENST00000621131 ZBTB26Q9HCK0 441 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 HEYLQ9NQ87 328 aaPredicted RBP5.8□□□□□ -1.48
VPS29-212ENST00000621131 SNX13Q9Y5W8 968 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 DCCP43146 1447 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 MSH6P52701 1360 aa5.8□□□□□ -1.48
VPS29-212ENST00000621131 INPPL1O15357 1258 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 THAP12O43422 761 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 KCNQ3O43525 872 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 PLAUP00749 431 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 ARP10275 920 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 ATF3P18847 181 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 PIK3CBP42338 1070 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 DGKQP52824 942 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 WDR5P61964 334 aaKnown RBP5.79□□□□□ -1.48
VPS29-212ENST00000621131 RAPGEF1Q13905 1077 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 P3H2Q8IVL5 708 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 CCDC146Q8IYE0 955 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 ARFGAP1Q8N6T3 406 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 ATP11CQ8NB49 1132 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 BCAS4Q8TDM0 211 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 WDR24Q96S15 920 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 POT1Q9NUX5 634 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 HS3ST3B1Q9Y662 390 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 OVOS2A0A0J9YW53 1432 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 OVOS2Q6IE36 1432 aa5.79□□□□□ -1.48
VPS29-212ENST00000621131 FAM90A10PA6NDY2 464 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 CD8B2A6NJW9 211 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 RHPN2P1A8MT19 583 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 APAF1O14727 1248 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 ATRNO75882 1429 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 CPA2P48052 419 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 C1QTNF8P60827 252 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 RAE1P78406 368 aaKnown RBP5.78□□□□□ -1.48
VPS29-212ENST00000621131 CALD1Q05682 793 aaKnown RBP5.78□□□□□ -1.48
VPS29-212ENST00000621131 ZNF543Q08ER8 600 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 LMOD3Q0VAK6 560 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 MTX1Q13505 466 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 ABLIM2Q6H8Q1 611 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 IQCDQ96DY2 449 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 MYH16Q9H6N6 1097 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 PNPLA8Q9NP80 782 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 ABHD10Q9NUJ1 306 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 CORO2BQ9UQ03 480 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 PIK3C2AO00443 1686 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 KIF24Q5T7B8 1368 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 PNPLA6Q8IY17 1366 aa5.78□□□□□ -1.48
VPS29-212ENST00000621131 C2CD4BA6NLJ0 364 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 CLCA1A8K7I4 914 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 CD63P08962 238 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 DUSP1P28562 367 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 HOXA7P31268 230 aaPredicted RBP5.77□□□□□ -1.49
VPS29-212ENST00000621131 IDUAP35475 653 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 FAM90A2PQ658T7 463 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 KIAA0408Q6ZU52 694 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 WDR63Q8IWG1 891 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 ANKRD13AQ8IZ07 590 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 RNF152Q8N8N0 203 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 ABHD5Q8WTS1 349 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 TRMT61AQ96FX7 289 aaKnown RBP5.77□□□□□ -1.49
VPS29-212ENST00000621131 FCRL5Q96RD9 977 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 RXFP3Q9NSD7 469 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 ARL8BQ9NVJ2 186 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 POLKQ9UBT6 870 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 VPS4AQ9UN37 437 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 HEMK1Q9Y5R4 338 aaPredicted RBP5.77□□□□□ -1.49
VPS29-212ENST00000621131 SBNO1A3KN83 1393 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 RTL1A6NKG5 1358 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 FLT4P35916 1363 aa5.77□□□□□ -1.49
VPS29-212ENST00000621131 GOLGB1Q14789 3259 aaKnown RBP5.77□□□□□ -1.49
VPS29-212ENST00000621131 SSH2Q76I76 1423 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 PQBP1O60828 265 aaKnown RBP5.76□□□□□ -1.49
VPS29-212ENST00000621131 COQ9O75208 318 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 OAZ2O95190 189 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 FGF2P09038 288 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 PSG1P11464 419 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 HOXB6P17509 224 aaKnown RBP5.76□□□□□ -1.49
VPS29-212ENST00000621131 AMPHP49418 695 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 B4GALNT1Q00973 533 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 GAB1Q13480 694 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 KLHDC7AQ5VTJ3 777 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 CRTC1Q6UUV9 634 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 PIM3Q86V86 326 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 DGKHQ86XP1 1220 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 TCP11L2Q8N4U5 519 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 KCNH5Q8NCM2 988 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 TTC17Q96AE7 1141 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 SCNM1Q9BWG6 230 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 TMEM8AQ9HCN3 771 aa5.76□□□□□ -1.49
VPS29-212ENST00000621131 C1orf167Q5SNV9 1468 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms