RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 KANSL1Q7Z3B3 1105 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 PIP4P1Q86T03 277 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 NKD2Q969F2 451 aaPredicted RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 PEBP4Q96S96 227 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 MAGEB5Q9BZ81 275 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 PCED1AQ9H1Q7 454 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 LRRC4Q9HBW1 653 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 PRSS16Q9NQE7 514 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 PRDM4Q9UKN5 801 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 STON1Q9Y6Q2 735 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 ATG2BQ96BY7 2078 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 MYO18AQ92614 2054 aaKnown RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 TMEM191CA6NGB0 347 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 PIK3R2O00459 728 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 CDX4O14627 284 aaPredicted RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 MTA2O94776 668 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 PEX11BO96011 259 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 MAMLD1Q13495 774 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 EOGTQ5NDL2 527 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 CAVIN1Q6NZI2 390 aaKnown RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 ANKS1BQ7Z6G8 1248 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 SIX6OS1Q8N1H7 587 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 TXNDC5Q8NBS9 432 aaKnown RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 TRIM44Q96DX7 344 aaPredicted RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 NSMCE3Q96MG7 304 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 BBS2Q9BXC9 721 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 MKRN2Q9H000 416 aaKnown RBP5.87□□□□□ -1.47
FMR1-217ENST00000620828 ARHGEF4Q9NR80 690 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 KCND1Q9NSA2 647 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 ELOVL2Q9NXB9 296 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 FZD10Q9ULW2 581 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 ZDBF2Q9HCK1 2354 aa5.87□□□□□ -1.47
FMR1-217ENST00000620828 DOCK9Q9BZ29 2069 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 LRRC53A6NM62 1247 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FAM72CH0Y354 149 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 SCAMP3O14828 347 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 CYP1A2P05177 515 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CD19P15391 556 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 STAT1P42224 750 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CTSOP43234 321 aaPredicted RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 TERF1P54274 439 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 RPS14P62263 151 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 KDSRQ06136 332 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 TAF12Q16514 161 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 PREPLQ4J6C6 727 aaPredicted RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 HSP90AA4PQ58FG1 418 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FAM72AQ5TYM5 149 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FAM72DQ6L9T8 149 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 SLC23A3Q6PIS1 610 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FAM72BQ86X60 149 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 APCDD1Q8J025 514 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 TMEM35BQ8NCS4 154 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CCDC26Q8TAB7 109 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 HHIPQ96QV1 700 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FBRSQ9HAH7 460 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 ARHGAP20Q9P2F6 1191 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FAM221BA6H8Z2 402 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 WASH3PC4AMC7 463 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FANCGO15287 622 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 GFPT2O94808 682 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 IRF1P10914 325 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 AIF1P55008 147 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 AUHQ13825 339 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 ALFQ53S48 1182 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 ZC3H12AQ5D1E8 599 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 RFWD3Q6PCD5 774 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 ZC3H14Q6PJT7 736 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 LRSAM1Q6UWE0 723 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 LUZP1Q86V48 1076 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 PASD1Q8IV76 773 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 HJURPQ8NCD3 748 aaPredicted RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 CPA5Q8WXQ8 436 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 TMEM121BQ9BXQ6 578 aaPredicted RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 DNAJC17Q9NVM6 304 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 TMEM248Q9NWD8 314 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 WSB2Q9NYS7 404 aaPredicted RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 DEC1Q9P2X7 70 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 LSM7Q9UK45 103 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 ADAMTS20P59510 1910 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 TSPAN11A1L157 253 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 SYCE3A1L190 88 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 PAGE1O75459 146 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 KRT5P13647 590 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 TRIM21P19474 475 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 HOXD12P35452 270 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 DRD3P35462 400 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 PITRM1Q5JRX3 1037 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 SASS6Q6UVJ0 657 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CACNA2D4Q7Z3S7 1137 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CADM4Q8NFZ8 388 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 IPO4Q8TEX9 1081 aaKnown RBP5.86□□□□□ -1.47
FMR1-217ENST00000620828 C18orf8Q96DM3 657 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 LRRC19Q9H756 370 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.86□□□□□ -1.47
FMR1-217ENST00000620828 TSPAN3O60637 253 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CNTN5O94779 1100 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 CTSLP07711 333 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 ZNF165P49910 485 aa5.86□□□□□ -1.47
FMR1-217ENST00000620828 RPS24P62847 133 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms