RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-223	ENST00000620632	ALLC	Q8N6M5	410 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	IL17RC	Q8NAC3	791 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	SPC24	Q8NBT2	197 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	SORCS1	Q8WY21	1168 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	TRIM11	Q96F44	468 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	DDX50	Q9BQ39	737 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	CNPY3	Q9BT09	278 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	IRX2	Q9BZI1	471 aa	Predicted RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	DEF6	Q9H4E7	631 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	ABCB8	Q9NUT2	735 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	SLC12A6	Q9UHW9	1150 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	INTS6	Q9UL03	887 aa	Known RBP	11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	STARD13	Q9Y3M8	1113 aa		11.15	□□□□□ -0.62
TARDBP-223	ENST00000620632	IGLV3-10	A0A075B6K4	115 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	ANKRD62	A6NC57	917 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632		E9PAM4	449 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	SGK1	O00141	431 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	AKR1B10	O60218	316 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	KLF8	O95600	359 aa	Predicted RBP	11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	PABPC1	P11940	636 aa	Known RBP	11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	NUBP1	P53384	320 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	TSR1	Q2NL82	804 aa	Known RBP	11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	MANEAL	Q5VSG8	457 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	TMEM92	Q6UXU6	159 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	ANKS1B	Q7Z6G8	1248 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	TMEM139	Q8IV31	216 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	PYROXD2	Q8N2H3	581 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	TXNDC5	Q8NBS9	432 aa	Known RBP	11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	FIBIN	Q8TAL6	211 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	FNIP1	Q8TF40	1166 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	EXOC4	Q96A65	974 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	NTAN1	Q96AB6	310 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	C1orf74	Q96LT6	269 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	CCDC42	Q96M95	316 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	RPRD1A	Q96P16	312 aa	Predicted RBP	11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	PANX2	Q96RD6	677 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	HAPLN3	Q96S86	360 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	IER2	Q9BTL4	223 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	NUP85	Q9BW27	656 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	SLC2A11	Q9BYW1	496 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	MPP6	Q9NZW5	540 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	ZNF212	Q9UDV6	495 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	GGA2	Q9UJY4	613 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	TFR2	Q9UP52	801 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	HCN4	Q9Y3Q4	1203 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632	SCIN	Q9Y6U3	715 aa		11.14	□□□□□ -0.63
TARDBP-223	ENST00000620632		A0A1B0GVM2	712 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	TCAF2	A6NFQ2	919 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	SOWAHD	A6NJG2	315 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	DRGX	A6NNA5	263 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	WASH3P	C4AMC7	463 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	LAMTOR5	O43504	91 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	LRCH4	O75427	683 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	PAPSS2	O95340	614 aa	Predicted RBP	11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	SP9	P0CG40	484 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	IL1R2	P27930	398 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	MZF1	P28698	734 aa	Predicted RBP	11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	WAS	P42768	502 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CXCL12	P48061	93 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CCR3	P51677	355 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	MRPS21	P82921	87 aa	Known RBP	11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CSTF1	Q05048	431 aa	Known RBP	11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	SCAP	Q12770	1279 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CDH18	Q13634	790 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	DMC1	Q14565	340 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CA9	Q16790	459 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	SCYL2	Q6P3W7	929 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CHST9	Q7L1S5	443 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	SYT13	Q7L8C5	426 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	APCDD1	Q8J025	514 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CYB5D2	Q8WUJ1	264 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	ERLEC1	Q96DZ1	483 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	ALG14	Q96F25	216 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	HHIP	Q96QV1	700 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CD248	Q9HCU0	757 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	MRPL47	Q9HD33	250 aa	Known RBP	11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	OSGEP	Q9NPF4	335 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	FAM86C1	Q9NVL1	165 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	GPATCH2L	Q9NWQ4	482 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	CACNA2D2	Q9NY47	1150 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	ANAPC7	Q9UJX3	599 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	FZD10	Q9ULW2	581 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	MMP17	Q9ULZ9	603 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	PAXBP1	Q9Y5B6	917 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	PLXND1	Q9Y4D7	1925 aa		11.13	□□□□□ -0.63
TARDBP-223	ENST00000620632	TYW5	A2RUC4	315 aa	Known RBP	11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632		H0Y626	953 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	SRGAP2	O75044	1071 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	LRIG2	O94898	1065 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	LCA5L	O95447	670 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	H2AFZ	P0C0S5	128 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	TMEM253	P0C7T8	217 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	MIP	P30301	263 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	CSK	P41240	450 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	IL12RB1	P42701	662 aa		11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	CTSO	P43234	321 aa	Predicted RBP	11.12	□□□□□ -0.63
TARDBP-223	ENST00000620632	PXN	P49023	591 aa	Predicted RBP	11.12	□□□□□ -0.63

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