RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ACDQ96AP0 544 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 CCDC124Q96CT7 223 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 FIZ1Q96SL8 496 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 FANCEQ9HB96 536 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 GDAP2Q9NXN4 497 aa10.64□□□□□ -0.71
VPS11-207ENST00000620429 DNMT3BQ9UBC3 853 aaKnown RBP10.64□□□□□ -0.71
VPS11-207ENST00000620429 ENTPD3O75355 529 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 GABBR2O75899 941 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 CYP1A2P05177 515 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 GLULP15104 373 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TGM1P22735 817 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 SREBF1P36956 1147 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TJAP1Q5JTD0 557 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ZNF618Q5T7W0 954 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 IZUMO3Q5VZ72 239 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 SLC47A2Q86VL8 602 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 HPS6Q86YV9 775 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 KIAA2013Q8IYS2 634 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 DCLK2Q8N568 766 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 Q8N9G6 341 aaPredicted RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 TNIP2Q8NFZ5 429 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 VTI1AQ96AJ9 217 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TXNDC15Q96J42 360 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 PSKH2Q96QS6 385 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ZNF347Q96SE7 839 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 KCNK16Q96T55 309 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TRIM56Q9BRZ2 755 aaKnown RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 OSBPL11Q9BXB4 747 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 AMNQ9BXJ7 453 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TMEM39BQ9GZU3 492 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 RUBCNLQ9H714 662 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 CXorf21Q9HAI6 301 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS11-207ENST00000620429 NOCTQ9UK39 431 aaKnown RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 UBE4BO95155 1302 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TRPM7Q96QT4 1865 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ARHGEF35A5YM69 484 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 SDR42E2A6NKP2 422 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 TSPAN9O75954 239 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 SLITRK3O94933 977 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 FOSP01100 380 aaPredicted RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 CES1P23141 567 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 VAMP7P51809 220 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ALDH18A1P54886 795 aaKnown RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 GNA12Q03113 381 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 NPTX1Q15818 432 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 CYP4A22Q5TCH4 519 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 NXNQ6DKJ4 435 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 RSBN1LQ6PCB5 846 aaPredicted RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 ADGRD1Q6QNK2 874 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 GMCL1P1Q8NEA9 526 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 JDP2Q8WYK2 163 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ZUFSPQ96AP4 578 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 PGBD4Q96DM1 585 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 CNDP2Q96KP4 475 aaKnown RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 ZNF597Q96LX8 424 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 HSD17B14Q9BPX1 270 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 FAM118BQ9BPY3 351 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 GLIS2Q9BZE0 524 aaPredicted RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 CLPBQ9H078 707 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ALG13Q9NP73 1137 aaKnown RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 SAYSD1Q9NPB0 183 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ZNF70Q9UC06 446 aaPredicted RBP10.63□□□□□ -0.71
VPS11-207ENST00000620429 PRR12Q9ULL5 1215 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ATRNL1Q5VV63 1379 aa10.63□□□□□ -0.71
VPS11-207ENST00000620429 ARHGEF37A1IGU5 675 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 TRIM64A6NGJ6 449 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 FADS2P1A8MWK0 482 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 TISP43B9A030 160 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 PROCP04070 461 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 ERBB2P04626 1255 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 EIF2AK2P19525 551 aaKnown RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 ZNF135P52742 658 aaPredicted RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 UBXN2AP68543 259 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 MRPS9P82933 396 aaKnown RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 FMO1Q01740 532 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 PDIA2Q13087 525 aaKnown RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 INSCQ1MX18 579 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 ATAD3BQ5T9A4 648 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 RNF19BQ6ZMZ0 732 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 SLC5A5Q92911 643 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 GMCL1Q96IK5 515 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 NACC1Q96RE7 527 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 HERPUD2Q9BSE4 406 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 DHRS4Q9BTZ2 278 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 HEMGNQ9BXL5 484 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 SEZ6LQ9BYH1 1024 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 C12orf4Q9NQ89 552 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 STK39Q9UEW8 545 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 DDHD2O94830 711 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 FOSL1P15407 271 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 ZNF26P17031 533 aaPredicted RBP10.62□□□□□ -0.71
VPS11-207ENST00000620429 MAPK4P31152 587 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 HPCAL1P37235 193 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 STX1BP61266 288 aa10.62□□□□□ -0.71
VPS11-207ENST00000620429 GRSF1Q12849 480 aaKnown RBP eCLIP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms