RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 CPA3P15088 417 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 FGFR3P22607 806 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 CALRP27797 417 aaKnown RBP16.47■□□□□ 0.23
DKC1-213ENST00000620277 GRIA2P42262 883 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 GALNT15Q8N3T1 639 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 SLC2A14Q8TDB8 520 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 CDKL2Q92772 493 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 SEMA6AQ9H2E6 1030 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 ATXN3LQ9H3M9 355 aa16.47■□□□□ 0.23
DKC1-213ENST00000620277 TMEM233B4DJY2 109 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 ARL4AP40617 200 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 SULT1E1P49888 294 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 LAYNQ6UX15 382 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 SNX32Q86XE0 403 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 CDKL3Q8IVW4 592 aaPredicted RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 DEFB106AQ8N104 65 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 CELF6Q96J87 481 aaKnown RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 CDRT15Q96T59 188 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 TIMM13Q9Y5L4 95 aaPredicted RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 SCN1AP35498 2009 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 SNNO75324 88 aaPredicted RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 ABCD1P33897 745 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 ROR2Q01974 943 aaKnown RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 DALRD3Q5D0E6 543 aaKnown RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 RNF217Q8TC41 542 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 SORT1Q99523 831 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 EIF2AQ9BY44 585 aaKnown RBP16.46■□□□□ 0.23
DKC1-213ENST00000620277 C2orf40Q9H1Z8 148 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 SNX15Q9NRS6 342 aa16.46■□□□□ 0.23
DKC1-213ENST00000620277 JUNP05412 331 aaKnown RBP16.45■□□□□ 0.22
DKC1-213ENST00000620277 ITGAXP20702 1163 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 RBP5P82980 135 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 MSLNQ13421 630 aaPredicted RBP16.45■□□□□ 0.22
DKC1-213ENST00000620277 NCBP2-AS2Q69YL0 99 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 MMADHCQ9H3L0 296 aaPredicted RBP16.45■□□□□ 0.22
DKC1-213ENST00000620277 CHRAC1Q9NRG0 131 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 MCM3APO60318 1980 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 TRDMT1O14717 391 aaKnown RBP16.45■□□□□ 0.22
DKC1-213ENST00000620277 ENDOD1O94919 500 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 CSPG5O95196 566 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 VCLP18206 1134 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 PDK2Q15119 407 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 CELF3Q5SZQ8 465 aaKnown RBP16.45■□□□□ 0.22
DKC1-213ENST00000620277 ZNF280DQ6N043 979 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 FBXL19Q6PCT2 694 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 LCLAT1Q6UWP7 414 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 DNERQ8NFT8 737 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 AFG1LQ8WV93 481 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 ANKRD27Q96NW4 1050 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 IARS2Q9NSE4 1012 aaKnown RBP16.45■□□□□ 0.22
DKC1-213ENST00000620277 COPG2Q9UBF2 871 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 SSX2IPQ9Y2D8 614 aa16.45■□□□□ 0.22
DKC1-213ENST00000620277 A0A1B0GTW7 788 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 C19orf81C9J6K1 198 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 FAM72CH0Y354 149 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 RANBP1P43487 201 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 ABCE1P61221 599 aaKnown RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 ADIGQ0VDE8 80 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 TUBB3Q13509 450 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 CYTH1Q15438 398 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 NRF1Q16656 503 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 FAM72AQ5TYM5 149 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 FAM72DQ6L9T8 149 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 FAM72BQ86X60 149 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 UBE2OQ9C0C9 1292 aaKnown RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 CDHR5Q9HBB8 845 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 TNFSF13BQ9Y275 285 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 A0A096LPK6 155 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 BCLAF3A2AJT9 711 aaKnown RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 ADM5C9JUS6 153 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 M0QYT0 321 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 TSPAN8P19075 237 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 HDCP19113 662 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 TGM2P21980 687 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 ICAM3P32942 547 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 NAGLUP54802 743 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 WASHC5Q12768 1159 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 SYPL2Q5VXT5 272 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 HFE2Q6ZVN8 426 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 KLHL4Q9C0H6 718 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 TASP1Q9H6P5 420 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 MTMR10Q9NXD2 777 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 ADAMTS5Q9UNA0 930 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 MGAMO43451 1857 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 KLF11O14901 512 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 BUD23O43709 281 aaKnown RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 SERPINE1P05121 402 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 GABRB2P47870 512 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 ACAP1Q15027 740 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 LIN52Q52LA3 116 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 SLC9A4Q6AI14 798 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 LBX2Q6XYB7 198 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 ARNTL2Q8WYA1 636 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 FRMD8P1Q9BZ68 369 aaPredicted RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 GRIP2Q9C0E4 1043 aa16.44■□□□□ 0.22
DKC1-213ENST00000620277 SUDS3Q9H7L9 328 aaPredicted RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
DKC1-213ENST00000620277 BEST1O76090 585 aa16.43■□□□□ 0.22
DKC1-213ENST00000620277 COX4I1P13073 169 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms