RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	CACNA2D1	P54289	1103 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ACSBG2	Q5FVE4	666 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	XKR4	Q5GH76	650 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	STEAP4	Q687X5	459 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	TIFAB	Q6ZNK6	161 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	LIMS2	Q7Z4I7	341 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ANKRD23	Q86SG2	305 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	APBB2	Q92870	758 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	THAP1	Q9NVV9	213 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	MKS1	Q9NXB0	559 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	UBP1	Q9NZI7	540 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ZFAT	Q9P243	1243 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	TXNDC16	Q9P2K2	825 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	STAP1	Q9ULZ2	295 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	HBS1L	Q9Y450	684 aa	Known RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	MRPL42	Q9Y6G3	142 aa	Known RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DICER1	Q9UPY3	1922 aa	Known RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	PRR5-ARHGAP8	B1AHC4	643 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	PPP1R12A	O14974	1030 aa	Predicted RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	FAM200B	P0CF97	657 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	TYK2	P29597	1187 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	GLUD2	P49448	558 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	CCNG1	P51959	295 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ADAM17	P78536	824 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ARHGAP8	P85298	464 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DPYS	Q14117	519 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	RCN1	Q15293	331 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	CCDC6	Q16204	474 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ATG14	Q6ZNE5	492 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	MARK2	Q7KZI7	788 aa	Known RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	CMC1	Q7Z7K0	106 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	C10orf107	Q8IVU9	208 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	HACE1	Q8IYU2	909 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	TOP6BL	Q8N6T0	577 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	ENDOV	Q8N8Q3	282 aa	Known RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DNAAF3	Q8N9W5	541 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	LPP	Q93052	612 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	NT5C3B	Q969T7	300 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	NAF1	Q96HR8	494 aa	Known RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	CLPTM1L	Q96KA5	538 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	SENP8	Q96LD8	212 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	AGAP2	Q99490	1192 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	FERMT1	Q9BQL6	677 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	SYT17	Q9BSW7	474 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	RHOBTB2	Q9BYZ6	727 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DNAI2	Q9GZS0	605 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DCLRE1B	Q9H816	532 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	CRTAC1	Q9NQ79	661 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	TMEM30A	Q9NV96	361 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	TMEM216	Q9P0N5	145 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.5	□□□□□ -0.57
TP53-223	ENST00000618944	DNAJC16	Q9Y2G8	782 aa		11.5	□□□□□ -0.57
TP53-223	ENST00000618944	MYO18A	Q92614	2054 aa	Known RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CCDC78	A2IDD5	438 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CAPN14	A8MX76	684 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	BIRC5	O15392	142 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	ZBTB24	O43167	697 aa	Predicted RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	ATP9B	O43861	1147 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	AP1G2	O75843	785 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	MYCN	P04198	464 aa	Predicted RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	TPH1	P17752	444 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PAX7	P23759	505 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	YY1	P25490	414 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	SLC1A6	P48664	564 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CRYBB1	P53674	252 aa	Predicted RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	KYAT3	Q6YP21	454 aa	Known RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CYS1	Q717R9	158 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	RSPH3	Q86UC2	560 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	RBM15B	Q8NDT2	890 aa	Known RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	WWP1	Q9H0M0	922 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	DONSON	Q9NYP3	566 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	SLC45A1	Q9Y2W3	748 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PLXNA1	Q9UIW2	1896 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	C17orf102	A2RUQ5	167 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	GOLGA8T	H3BQL2	631 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	DCLK1	O15075	740 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PLIN3	O60664	434 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	POLB	P06746	335 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	FGF3	P11487	239 aa	Predicted RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CYP2B6	P20813	491 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PTPN3	P26045	913 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CNTF	P26441	200 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CLCNKB	P51801	687 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	TPI1	P60174	286 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	THOC5	Q13769	683 aa	Known RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PAFAH1B3	Q15102	231 aa	Known RBP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
TP53-223	ENST00000618944	CERCAM	Q5T4B2	595 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	TEDDM1	Q5T9Z0	273 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	MBLAC2	Q68D91	279 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	TNS4	Q8IZW8	715 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	NPW	Q8N729	165 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	ATP2A3	Q93084	1043 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PCED1B	Q96HM7	432 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	ZNF778	Q96MU6	729 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	SLC2A13	Q96QE2	648 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	GAD1	Q99259	594 aa		11.49	□□□□□ -0.57
TP53-223	ENST00000618944	PARK7	Q99497	189 aa	Known RBP	11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms