RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 CNTFP26441 200 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 HTR7P34969 479 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 CCDC15Q0P6D6 951 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 SF3A3Q12874 501 aaKnown RBP eCLIP16.15■□□□□ 0.186e-9■■■■■ 32.1
NR1H3-235ENST00000616973 NAB1Q13506 487 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 MBTPS1Q14703 1052 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 NOMO2Q5JPE7 1267 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 BRMS1LQ5PSV4 323 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 ZNF449Q6P9G9 518 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 TRMT10BQ6PF06 316 aaKnown RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 MARK2Q7KZI7 788 aaKnown RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 PID1Q7Z2X4 250 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 NPWQ8N729 165 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 URGCPQ8TCY9 931 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 LINC01599Q8WXQ3 324 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 SPOCK2Q92563 424 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 KLF6Q99612 283 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 RXFP1Q9HBX9 757 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 VWA8A3KMH1 1905 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 ERI2A8K979 691 aaKnown RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 IRAK2O43187 625 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 DDHD2O94830 711 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 LRIG2O94898 1065 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 OAZ2O95190 189 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 COL6A1P12109 1028 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 GARSP41250 739 aaKnown RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 CLLU1OSQ5K130 101 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 TIFABQ6ZNK6 161 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 PACS2Q86VP3 889 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 COLGALT2Q8IYK4 626 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 CCDC63Q8NA47 563 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 NETO2Q8NC67 525 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 ARNTL2Q8WYA1 636 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 HAPLN3Q96S86 360 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 ZCWPW1Q9H0M4 648 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 TRPV6Q9H1D0 765 aa16.15■□□□□ 0.18
NR1H3-235ENST00000616973 KLHL8Q9P2G9 620 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 FNDC1Q4ZHG4 1894 aaPredicted RBP16.15■□□□□ 0.18
NR1H3-235ENST00000616973 WDR27A2RRH5 827 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 F8W810 466 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 B4GALT3O60512 393 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 EPHB2P29323 1055 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 SLC5A3P53794 718 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 NIPAL4Q0D2K0 466 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 ZNF280BQ86YH2 543 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 SCAMP5Q8TAC9 235 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 DPF3Q92784 378 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 CEP41Q9BYV8 373 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 SMOC2Q9H3U7 446 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 MANSC1Q9H8J5 431 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 SLCO1B3Q9NPD5 702 aa16.14■□□□□ 0.17
NR1H3-235ENST00000616973 KCNK1O00180 336 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 COPEO14579 308 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 RFPL1O75677 317 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 UBOX5O94941 541 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 GNRH1P01148 92 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 MGAT1P26572 445 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 GRIK1P39086 918 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 MGAT5Q09328 741 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 BTBD8Q5XKL5 378 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 ITPRIPL1Q6GPH6 555 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 DCP1BQ8IZD4 617 aaKnown RBP16.13■□□□□ 0.17
NR1H3-235ENST00000616973 CD99L2Q8TCZ2 262 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 ZNF398Q8TD17 642 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 DEPDC1BQ8WUY9 529 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 RNF34Q969K3 372 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 RMDN2Q96LZ7 410 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 GORASP1Q9BQQ3 440 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 TRIM56Q9BRZ2 755 aaKnown RBP16.13■□□□□ 0.17
NR1H3-235ENST00000616973 FTHL17Q9BXU8 183 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 GBA3Q9H227 469 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 USH1CQ9Y6N9 552 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 A0A1W2PQ45 241 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-235ENST00000616973 A0A1W2PQY0 241 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 UGT1A9O60656 530 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 RASSF9O75901 435 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 AP2A1O95782 977 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 IL1BP01584 269 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 HOXC13P31276 330 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 COG7P83436 770 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 BNIP1Q12981 228 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 TEX44Q53QW1 395 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 LHX8Q68G74 356 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 KCTD11Q693B1 232 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 OTOAQ7RTW8 1153 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 CDKL2Q92772 493 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 FUBP3Q96I24 572 aaKnown RBP eCLIP16.13■□□□□ 0.17
NR1H3-235ENST00000616973 TSGA13Q96PP4 275 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 SRPK1Q96SB4 655 aaKnown RBP16.13■□□□□ 0.17
NR1H3-235ENST00000616973 UGT1A7Q9HAW7 530 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 UGT1A10Q9HAW8 530 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 UGT1A8Q9HAW9 530 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 TBC1D13Q9NVG8 400 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 NEU3Q9UQ49 428 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 SNX10Q9Y5X0 201 aa16.13■□□□□ 0.17
NR1H3-235ENST00000616973 TTC3P53804 2025 aa16.12■□□□□ 0.17
NR1H3-235ENST00000616973 KIF3CO14782 793 aa16.12■□□□□ 0.17
NR1H3-235ENST00000616973 SESN2P58004 480 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-235ENST00000616973 FRG1Q14331 258 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms