RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SPATA24Q86W54 205 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 LZTR1Q8N653 840 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 TEX9Q8N6V9 391 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 NDFIP2Q9NV92 336 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 RGS17Q9UGC6 210 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 PRKAG2Q9UGJ0 569 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 MYBPHLA2RUH7 354 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 HCRTO43612 131 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 TMEM63AO94886 807 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 YWHAQP27348 245 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 LRRC36Q1X8D7 754 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 SEPT8Q92599 483 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 UBE2OQ9C0C9 1292 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 CDHR5Q9HBB8 845 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 CYP4F12Q9HCS2 524 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ADGRA2Q96PE1 1338 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 TPP1O14773 563 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 MFSD11O43934 449 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ATP6V1G2O95670 118 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 CALB2P22676 271 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ECHS1P30084 290 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 RENBPP51606 427 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 UNC5AQ6ZN44 842 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 PRDM16Q9HAZ2 1276 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 THAP1Q9NVV9 213 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 PCDHA11Q9Y5I1 949 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 BCLAF3A2AJT9 711 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ELNP15502 786 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC1A6P48664 564 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF177Q13360 481 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 ARHGAP17Q68EM7 881 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 DEFB128Q7Z7B8 93 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 WDTC1Q8N5D0 677 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 CERS2Q96G23 380 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 KCNK16Q96T55 309 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 CPNE1Q99829 537 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 C16orf70Q9BSU1 422 aa13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 CINPQ9BW66 212 aaPredicted RBP13.5□□□□□ -0.25
PPP4R3B-206ENST00000616407 PDE4DIPQ5VU43 2346 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 IGKV6-21A0A0C4DH24 114 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 DNAJC8O75937 253 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF132P52740 706 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 COPAP53621 1224 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 CLDN10P78369 228 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 RNF219Q5W0B1 726 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ELMOD1Q8N336 334 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 HNRNPABQ99729 332 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 EGFL8Q99944 293 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 FAM124BQ9H5Z6 455 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 TLR8Q9NR97 1041 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 CDYLQ9Y232 598 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 H7C4K7 107 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 RAMP2O60895 175 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SKAP2O75563 359 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ENDOD1O94919 500 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SERPINE1P05121 402 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 KLRC2P26717 231 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ATXN3P54252 364 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 KCNJ2P63252 427 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC25A11Q02978 314 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 BST1Q10588 318 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 LAMB3Q13751 1172 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 MAP7Q14244 749 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 OTOAQ7RTW8 1153 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 TMEM130Q8N3G9 435 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC44A1Q8WWI5 657 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SEC14L1Q92503 715 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 OXNAD1Q96HP4 312 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SFMBT1Q9UHJ3 866 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 LGALS13Q9UHV8 139 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 L3MBTL1Q9Y468 752 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC30A1Q9Y6M5 507 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 LAMB2P55268 1798 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 FAM237BA0A1B0GVD1 139 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 TBKBP1A7MCY6 615 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 E9PBE3 544 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 KLHL41O60662 606 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 EDN1P05305 212 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ASGR1P07306 291 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 OR1E1P30953 314 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 CSHL1Q14406 222 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ANKS1BQ7Z6G8 1248 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ARHGEF4Q9NR80 690 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 RABGEF1Q9UJ41 708 aa13.49□□□□□ -0.25
PPP4R3B-206ENST00000616407 ANP32DO95626 131 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF135P52742 658 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 TUSC3Q13454 348 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 OASLQ15646 514 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms