RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 MYL4P12829 197 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 TAS2R40P59535 323 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 GPATCH4Q5T3I0 446 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 GOLM1Q8NBJ4 401 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 GIPC2Q8TF65 315 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 GBA3Q9H227 469 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 PAK5Q9P286 719 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 PI4KBQ9UBF8 816 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 ADAM23O75077 832 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 DBTP11182 482 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 TRAF3Q13114 568 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 SNRNP35Q16560 246 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 FNBP1LQ5T0N5 605 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 PCDHAC1Q9H158 963 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 COG4Q9H9E3 785 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 EGFL7Q9UHF1 273 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 A8MV72 311 aaPredicted RBP13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 ZBTB5O15062 677 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 CDH1P12830 882 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 ATP6V1B2P21281 511 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 RPL22P35268 128 aaKnown RBP13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 IL5RAQ01344 420 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 TCP10Q12799 353 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 DPYSQ14117 519 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 LRRC20Q8TCA0 184 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 VPS33AQ96AX1 596 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 TUBGCP3Q96CW5 907 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 SCN3BQ9NY72 215 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 SLC39A10Q9ULF5 831 aa13.85□□□□□ -0.19
PPP4R3B-205ENST00000616288 CCDC162PA2VCL2 907 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 MRASO14807 208 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 CLPXO76031 633 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 MT-ND1P03886 318 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 GNL1P36915 607 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 PLIN5Q00G26 463 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 CLEC16AQ2KHT3 1053 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 SPANXN2Q5MJ10 180 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 C10orf107Q8IVU9 208 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 GLIS1Q8NBF1 620 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 HM13Q8TCT9 377 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 ZNF512Q96ME7 567 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 PRRG3Q9BZD7 231 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 MIR1-1HGQ9H1L0 117 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 TP63Q9H3D4 680 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 AXIN2Q9Y2T1 843 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 NOX1Q9Y5S8 564 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 FAM208AQ9UK61 1670 aaKnown RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 TRIM24O15164 1050 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 DENRO43583 198 aaKnown RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 ADSSP30520 456 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 ABCG1P45844 678 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 ANKRD22Q5VYY1 191 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 HEATR6Q6AI08 1181 aaKnown RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 SNX29P2Q8IUI4 249 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 CCDC28AQ8IWP9 274 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 PHTF2Q8N3S3 785 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 C12orf50Q8NA57 414 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 TAS1R2Q8TE23 839 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 KRT87PA6NCN2 255 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 SNX17Q15036 470 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 CEP78Q5JTW2 689 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 C12orf60Q5U649 245 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 ANKS1BQ7Z6G8 1248 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 SNX31Q8N9S9 440 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 LPGAT1Q92604 370 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 RNF145Q96MT1 663 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 ADI1Q9BV57 179 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 TOPORSQ9NS56 1045 aaPredicted RBP13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 DNAJC28Q9NX36 388 aa13.84□□□□□ -0.19
PPP4R3B-205ENST00000616288 RGS20O76081 388 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 LDLRP01130 860 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 CHRNB1P11230 501 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 PRKACAP17612 351 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 RPL10P27635 214 aaKnown RBP13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 RPL26P61254 145 aaKnown RBP13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 CBWD2Q8IUF1 395 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 MCFD2Q8NI22 146 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 ADPGKQ9BRR6 497 aa13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 TRMT13Q9NUP7 481 aaKnown RBP13.83□□□□□ -0.19
PPP4R3B-205ENST00000616288 ANKRD34BA5PLL1 514 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 TISP43B9A030 160 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 E5RJQ4 531 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 AQP9O43315 295 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 SERPINB2P05120 415 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 MARSP56192 900 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 RAB14P61106 215 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 TRIM32Q13049 653 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 TRIM72Q6ZMU5 477 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 MMAAQ8IVH4 418 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ZDHHC14Q8IZN3 488 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ASCC1Q8N9N2 400 aaKnown RBP13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 FAR1Q8WVX9 515 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 TUFT1Q9NNX1 390 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 ATP6V1HQ9UI12 483 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 LOC100506127A0A0U1RQW1 187 aa13.83□□□□□ -0.2
PPP4R3B-205ENST00000616288 NR5A2O00482 541 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms