RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ACSL1P33121 698 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 TBX4P57082 545 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 RPS14P62263 151 aaKnown RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 MAN2A1Q16706 1144 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 EXOC3L4Q17RC7 722 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 HLA-BQ31612 363 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 RFWD3Q6PCD5 774 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 LRSAM1Q6UWE0 723 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 CLEC4CQ8WTT0 213 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 GOLGA1Q92805 767 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 UBE2TQ9NPD8 197 aaPredicted RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 PRSS16Q9NQE7 514 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 TM7SF3Q9NS93 570 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 FNDC3AQ9Y2H6 1198 aaKnown RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 PCDHGB2Q9Y5G2 931 aa19.67■□□□□ 0.74
CDX1-202ENST00000616154 DSPP15924 2871 aaKnown RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 TP53BP1Q12888 1972 aaPredicted RBP19.67■□□□□ 0.74
CDX1-202ENST00000616154 CACNA1GO43497 2377 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 GOLGA6L7A0A1B0GV03 622 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 POLR2EP19388 210 aaKnown RBP19.66■□□□□ 0.74
CDX1-202ENST00000616154 SLC9A1P19634 815 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 PON1P27169 355 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 AFF3P51826 1226 aaKnown RBP19.66■□□□□ 0.74
CDX1-202ENST00000616154 MIIPQ5JXC2 388 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 NADSYN1Q6IA69 706 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 HJURPQ8NCD3 748 aaPredicted RBP19.66■□□□□ 0.74
CDX1-202ENST00000616154 STK32AQ8WU08 396 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 SHC3Q92529 594 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 SNX19Q92543 992 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 LMLNQ96KR4 655 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 CRACR2AQ9BSW2 395 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 OSGEPQ9NPF4 335 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 SUN2Q9UH99 717 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 APOBEC2Q9Y235 224 aaKnown RBP19.66■□□□□ 0.74
CDX1-202ENST00000616154 FREM2Q5SZK8 3169 aa19.66■□□□□ 0.74
CDX1-202ENST00000616154 NYNRINQ9P2P1 1898 aaKnown RBP19.66■□□□□ 0.74
CDX1-202ENST00000616154 A0A1B0GVT2 93 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 BECN2A8MW95 431 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 SEMA4FO95754 770 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 DNTTP04053 509 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 GPD2P43304 727 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 MTIF2P46199 727 aaKnown RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 NNTQ13423 1086 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 TTC31Q49AM3 519 aaPredicted RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 DPY19L2P1Q6NXN4 242 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 DBX2Q6ZNG2 339 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 MFN1Q8IWA4 741 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 FIBINQ8TAL6 211 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 BAHD1Q8TBE0 780 aaPredicted RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 SETD7Q8WTS6 366 aaKnown RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 TTC17Q96AE7 1141 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 FCRL2Q96LA5 508 aaPredicted RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 PRICKLE1Q96MT3 831 aaPredicted RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 DDX50Q9BQ39 737 aaKnown RBP19.65■□□□□ 0.74
CDX1-202ENST00000616154 BTBD1Q9H0C5 482 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 SIX2Q9NPC8 291 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 SLCO1B1Q9Y6L6 691 aa19.65■□□□□ 0.74
CDX1-202ENST00000616154 CALCAP01258 141 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 CAPNS1P04632 268 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 FYNP06241 537 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 CSNK1EP49674 416 aaKnown RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 TPD52L1Q16890 204 aaPredicted RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 KIF19Q2TAC6 998 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 ZNF776Q68DI1 518 aaPredicted RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 PNPLA1Q8N8W4 532 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 ENOX1Q8TC92 643 aaKnown RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 DQX1Q8TE96 717 aaKnown RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 MYO19Q96H55 970 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 SERPINB11Q96P15 392 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 TUBGCP2Q9BSJ2 902 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 MIS12Q9H081 205 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 RSPH9Q9H1X1 276 aaPredicted RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 NDST4Q9H3R1 872 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 SGK2Q9HBY8 427 aa19.64■□□□□ 0.73
CDX1-202ENST00000616154 KIAA1522Q9P206 1035 aaPredicted RBP19.64■□□□□ 0.73
CDX1-202ENST00000616154 TYW5A2RUC4 315 aaKnown RBP19.63■□□□□ 0.73
CDX1-202ENST00000616154 FLRT2O43155 660 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 SART1O43290 800 aaKnown RBP19.63■□□□□ 0.73
CDX1-202ENST00000616154 PLXNA2O75051 1894 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 ASLP04424 464 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 KRT5P13647 590 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 GRIA4P48058 902 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 TEAD4Q15561 434 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 VWA3BQ502W6 1294 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 GJB7Q6PEY0 223 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 BEND5Q7L4P6 421 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 SLCO6A1Q86UG4 719 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 ZNF606Q8WXB4 792 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 BIRC7Q96CA5 298 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 SLC39A13Q96H72 371 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 TM9SF3Q9HD45 589 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 STIM2Q9P246 746 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 TLR6Q9Y2C9 796 aa19.63■□□□□ 0.73
CDX1-202ENST00000616154 MED7O43513 233 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 EEF1GP26641 437 aaKnown RBP19.62■□□□□ 0.73
CDX1-202ENST00000616154 CD27P26842 260 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 CSKP41240 450 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 RPS24P62847 133 aaKnown RBP19.62■□□□□ 0.73
CDX1-202ENST00000616154 APBA1Q02410 837 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms