RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 GMPSP49915 693 aaPredicted RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 HNRNPFP52597 415 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 IST1P53990 364 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 PLTPP55058 493 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 RPS3AP61247 264 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 KCNJ2P63252 427 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 MLLT1Q03111 559 aaPredicted RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 RALGDSQ12967 914 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 LPIN1Q14693 890 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 TARBP2Q15633 366 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CLEC16AQ2KHT3 1053 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 ZNF568Q3ZCX4 644 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 SUPT20HL1Q3ZLR7 823 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 TNFAIP8L3Q5GJ75 292 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 PPP6R3Q5H9R7 873 aaPredicted RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 ARMC4Q5T2S8 1044 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 METTL2BQ6P1Q9 378 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CYFIP1Q7L576 1253 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 DPH6Q7L8W6 267 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CROCCP2Q86T23 111 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 JAMLQ86YT9 394 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 MMAAQ8IVH4 418 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CHPFQ8IZ52 775 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 AGGF1Q8N302 714 aaeCLIP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 PPM1KQ8N3J5 372 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 RIBC1Q8N443 379 aaPredicted RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 NATD1Q8N6N6 113 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 C7orf57Q8NEG2 295 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CHST13Q8NET6 341 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 EXD1Q8NHP7 514 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CEP70Q8NHQ1 597 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 POMGNT1Q8WZA1 660 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 GLG1Q92896 1179 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 FAM149B1Q96BN6 582 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 ACAP3Q96P50 834 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 POP1Q99575 1024 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 SH2D3AQ9BRG2 576 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CELF4Q9BZC1 486 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 CCDC113Q9H0I3 377 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 PORCNQ9H237 461 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 PABPC3Q9H361 631 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 EHD1Q9H4M9 534 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 TUT1Q9H6E5 874 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 ACAD9Q9H845 621 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 C10orf88Q9H8K7 445 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 BRD9Q9H8M2 597 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 FANCEQ9HB96 536 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 ERVK-5Q9HDB9 667 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 METTL5Q9NRN9 209 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 HOMER2Q9NSB8 354 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 TBC1D23Q9NUY8 699 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 DDX43Q9NXZ2 648 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 GRHL1Q9NZI5 618 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 SLC12A6Q9UHW9 1150 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 APOBEC2Q9Y235 224 aaKnown RBP6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 TMEM5Q9Y2B1 443 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 STK38LQ9Y2H1 464 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 AFG3L2Q9Y4W6 797 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 ADGRA3Q8IWK6 1321 aa6.89□□□□□ -1.31
CDKAL1-204ENST00000613575 OR5K4A6NMS3 321 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PEX11AO75192 247 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 GMNNO75496 209 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 ESRRBO95718 433 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PRLP01236 227 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 ITGB3P05106 788 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 RARAP10276 462 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 SFTPCP11686 197 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 RARGP13631 454 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 EPB42P16452 691 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 ZNF3P17036 446 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 VCLP18206 1134 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 MX2P20592 715 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 ACO1P21399 889 aaKnown RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 IL10P22301 178 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PSMA4P25789 261 aaKnown RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PTGS2P35354 604 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 COILP38432 576 aaPredicted RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 NAMPTP43490 491 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 ARSDP51689 593 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 MLLT6P55198 1093 aaPredicted RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 NAA20P61599 178 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PPP2R2BQ00005 443 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 CD83Q01151 205 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PFKPQ01813 784 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 SP2Q02086 613 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PRKCEQ02156 737 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 RELQ04864 619 aaPredicted RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 GRM1Q13255 1194 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 SEMA3AQ14563 771 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 MESDQ14696 234 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 CCDC6Q16204 474 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PHKG1Q16816 387 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 RNASEH2BQ5TBB1 312 aaKnown RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 PPP1R2P3Q6NXS1 205 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 TRIM72Q6ZMU5 477 aa6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 SYDE1Q6ZW31 735 aaPredicted RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 APOBEC3FQ8IUX4 373 aaKnown RBP6.88□□□□□ -1.31
CDKAL1-204ENST00000613575 CCDC60Q8IWA6 550 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms