RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 EIF4HQ15056 248 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 TCEAL1Q15170 157 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 ERMARDQ5T6L9 678 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 RNF43Q68DV7 783 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 CHST9Q7L1S5 443 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 PSTKQ8IV42 348 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 CCAR2Q8N163 923 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 FIBINQ8TAL6 211 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 UCMAQ8WVF2 138 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 CLDN23Q96B33 292 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 BTBD6Q96KE9 485 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
MDC1-209ENST00000613547 PPP1R9BQ96SB3 815 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 EPAS1Q99814 870 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 ZYG11BQ9C0D3 744 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 ABCB8Q9NUT2 735 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 PCSK1NQ9UHG2 260 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 FZD10Q9ULW2 581 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 F5P12259 2224 aa13.68□□□□□ -0.22
MDC1-209ENST00000613547 A0A0A0MRY4 1105 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 DRGXA6NNA5 263 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 TMEM110-MUSTN1A8MSY1 372 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 TIMM44O43615 452 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 PI15O43692 258 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 ATG13O75143 517 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 CISD3P0C7P0 127 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 AVPR2P30518 371 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 L1CAMP32004 1257 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 MAN1A1P33908 653 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 HTR7P34969 479 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 ZNF135P52742 658 aaPredicted RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 HADHBP55084 474 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 MESDQ14696 234 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 C5orf22Q49AR2 442 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 RWDD4Q6NW29 188 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 TRMT11Q7Z4G4 463 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 C14orf80Q86SX3 495 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 CIR1Q86X95 450 aaPredicted RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 AHI1Q8N157 1196 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 ZNF687Q8N1G0 1237 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 ACRBPQ8NEB7 543 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 ACDQ96AP0 544 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 TBC1D31Q96DN5 1066 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 MYEOVQ96EZ4 313 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 SNRNP25Q9BV90 132 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 DHX35Q9H5Z1 703 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 RETREG1Q9H6L5 497 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 RBM12Q9NTZ6 932 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 KIAA1522Q9P206 1035 aaPredicted RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 PPARGC1AQ9UBK2 798 aaKnown RBP13.67□□□□□ -0.22
MDC1-209ENST00000613547 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 AP4E1Q9UPM8 1137 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 SNX10Q9Y5X0 201 aa13.67□□□□□ -0.22
MDC1-209ENST00000613547 COL4A3Q01955 1670 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 IGLV3-10A0A075B6K4 115 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 TRIM24O15164 1050 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 CREB3O43889 395 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 RNF40O75150 1001 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 LRIG2O94898 1065 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 KRT7P08729 469 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 PABPC1P11940 636 aaKnown RBP13.66□□□□□ -0.22
MDC1-209ENST00000613547 RHOQP17081 205 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 EPHB2P29323 1055 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 SLC1A1P43005 524 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 NUBP1P53384 320 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 NAP1L1P55209 391 aaKnown RBP13.66□□□□□ -0.22
MDC1-209ENST00000613547 MRPS21P82921 87 aaKnown RBP13.66□□□□□ -0.22
MDC1-209ENST00000613547 SLC12A1Q13621 1099 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 DMC1Q14565 340 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
MDC1-209ENST00000613547 HSF5Q4G112 596 aaPredicted RBP13.66□□□□□ -0.22
MDC1-209ENST00000613547 C6orf118Q5T5N4 469 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 MANEALQ5VSG8 457 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 ZNF683Q8IZ20 524 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.66□□□□□ -0.22
MDC1-209ENST00000613547 TMEM105Q8N8V8 129 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 P2RY11Q96G91 374 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 LRFN3Q9BTN0 628 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 CIPCQ9C0C6 399 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 ZWILCHQ9H900 591 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 DONSONQ9NYP3 566 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 CLEC4EQ9ULY5 219 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 MUC3AQ02505 3323 aa13.66□□□□□ -0.22
MDC1-209ENST00000613547 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 CHURC1-FNTBB4DL54 471 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 K7EQS6 105 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 NPC1O15118 1278 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 FGF10O15520 208 aaPredicted RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 DAPK3O43293 454 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 ATP5BP06576 529 aaKnown RBP13.65□□□□□ -0.22
MDC1-209ENST00000613547 RHOCP08134 193 aa13.65□□□□□ -0.22
MDC1-209ENST00000613547 POLR2EP19388 210 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms