RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 hCG_1818297A0A087WSY0 165 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 MOXD2PA6NHM9 499 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 CLASP2O75122 1294 aaKnown RBP8.93□□□□□ -0.98
PDE6A-204ENST00000613228 DDHD2O94830 711 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 UBOX5O94941 541 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 WARSP23381 471 aaKnown RBP8.93□□□□□ -0.98
PDE6A-204ENST00000613228 GRB14Q14449 540 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 USP10Q14694 798 aaKnown RBP8.93□□□□□ -0.98
PDE6A-204ENST00000613228 C16orf72Q14CZ0 275 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 DUPD1Q68J44 220 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 STRADAQ7RTN6 431 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 PRUNE1Q86TP1 453 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.93□□□□□ -0.98
PDE6A-204ENST00000613228 B3GALNT2Q8NCR0 500 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 KAT5Q92993 513 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 ASIC4Q96FT7 647 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 ZCWPW1Q9H0M4 648 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 PRDM5Q9NQX1 630 aaPredicted RBP8.93□□□□□ -0.98
PDE6A-204ENST00000613228 ZNF212Q9UDV6 495 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 RPL26L1Q9UNX3 145 aaKnown RBP8.93□□□□□ -0.98
PDE6A-204ENST00000613228 ZNF232Q9UNY5 417 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 IPPQ9Y573 584 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 PCDHB12Q9Y5F1 795 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 SHANK3Q9BYB0 1731 aa8.93□□□□□ -0.98
PDE6A-204ENST00000613228 CACNA1SQ13698 1873 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ZNF263O14978 683 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CNOT3O75175 753 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 STAU1O95793 577 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SMPD1P17405 629 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 YWHAQP27348 245 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 TBX4P57082 545 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 NAA20P61599 178 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 OR2W6PQ8NHA6 318 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SLC26A7Q8TE54 656 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CRYGNQ8WXF5 182 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 LBHD1Q9BQE6 289 aaPredicted RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 UPF3AQ9H1J1 476 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 NOCTQ9UK39 431 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 USP20Q9Y2K6 914 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CASTOR2A6NHX0 329 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SLCO1B7G3V0H7 640 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ZNF862O60290 1169 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 MGRN1O60291 552 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 MMP8P22894 467 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ST8SIA6P61647 398 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 JAG1P78504 1218 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 BEX3Q00994 111 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 MGAT5Q09328 741 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CDH17Q12864 832 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ZNF792Q3KQV3 632 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 HSDL1Q3SXM5 330 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 FASTKD1Q53R41 847 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 MRNIPQ6NTE8 343 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 DEFB106AQ8N104 65 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SLAIN1Q8ND83 568 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 DACT3Q96B18 629 aaPredicted RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CMTM5Q96DZ9 223 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CEP19Q96LK0 163 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CPNE1Q99829 537 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 TMEM121Q9BTD3 319 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SLC13A1Q9BZW2 595 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ADAMTS5Q9UNA0 930 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 TRPC5OSA6NMA1 111 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 C2orf81A6NN90 581 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ADAMTS3O15072 1205 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 CRTAMO95727 393 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 PENKP01210 267 aaPredicted RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 C21orf59P57076 290 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ABCE1P61221 599 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 PDCD4Q53EL6 469 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SNX30Q5VWJ9 437 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 LVRNQ6Q4G3 990 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 GPR141Q7Z602 305 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 EMC1Q8N766 993 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 OR6P1Q8NGX9 317 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 MRPS31Q92665 395 aaKnown RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 E2F7Q96AV8 911 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 PAFAH2Q99487 392 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 GTSE1Q9NYZ3 720 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 NINJ2Q9NZG7 142 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 TEKT2Q9UIF3 430 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 MKL2Q9ULH7 1088 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 PRG3Q9Y2Y8 225 aaPredicted RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ASNA1O43681 348 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SP100P23497 879 aaPredicted RBP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 USP46P62068 366 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 NOMO2Q5JPE7 1267 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 KCNT1Q5JUK3 1230 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 BRMS1LQ5PSV4 323 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 FAAH2Q6GMR7 532 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 YAF2Q8IY57 180 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 NIPA2Q8N8Q9 360 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 COLGALT1Q8NBJ5 622 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ADAM2Q99965 735 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 EMILIN2Q9BXX0 1053 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 ADAM28Q9UKQ2 775 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 DOCK2Q92608 1830 aa8.92□□□□□ -0.98
PDE6A-204ENST00000613228 SF3B1O75533 1304 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDE6A-204ENST00000613228 NDUFS3O75489 264 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms