RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 C12orf60Q5U649 245 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ARHGEF19Q8IW93 802 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF248Q8NDW4 579 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SIPA1Q96FS4 1042 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FUCA2Q9BTY2 467 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KLHL4Q9C0H6 718 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SLAIN2Q9P270 581 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 STK39Q9UEW8 545 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HEG1Q9ULI3 1381 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SHOXO15266 292 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 EIF3DO15371 548 aaKnown RBP eCLIP11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PSTPIP1O43586 416 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ASS1P00966 412 aaKnown RBP11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RFC5P40937 340 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF41P51814 821 aaPredicted RBP11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TMEM132BQ14DG7 1078 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ESPNLQ6ZVH7 1005 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FOXRED2Q8IWF2 684 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KCNIP3Q9Y2W7 256 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PCDHA11Q9Y5I1 949 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PDS5AQ29RF7 1337 aaKnown RBP11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF185O15231 689 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CMPK1P30085 196 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 AP2S1P53680 142 aaPredicted RBP11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CYP4F2P78329 520 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CYP4F3Q08477 520 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NAE1Q13564 534 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 UGCGQ16739 394 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CARD16Q5EG05 197 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 AFTPHQ6ULP2 937 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PDIK1LQ8N165 341 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 BPIFA3Q9BQP9 254 aa11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CNOT11Q9UKZ1 510 aaKnown RBP11.05□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HMX3A6NHT5 357 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 VILLO15195 856 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SLC16A8O95907 504 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 IFNA6P05013 189 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MYL2P10916 166 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ST3GAL1Q11201 340 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RAB32Q13637 225 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NYAP1Q6ZVC0 841 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CYP2U1Q7Z449 544 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF808Q8N4W9 903 aaPredicted RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 BOLLQ8N9W6 283 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GALNT6Q8NCL4 622 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NOD2Q9HC29 1040 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MRPL47Q9HD33 250 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FARSBQ9NSD9 589 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HAO2Q9NYQ3 351 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HSPA12AO43301 675 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SULT1E1P49888 294 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GFPT1Q06210 699 aaPredicted RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TMC3Q7Z5M5 1100 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 POLNQ7Z5Q5 900 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ADSSL1Q8N142 457 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 DHRSXQ8N5I4 330 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF655Q8N720 491 aaPredicted RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 POC1BQ8TC44 478 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ABCB9Q9NP78 766 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SNX7Q9UNH6 387 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 LOC102724428A0A0B4J2F2 783 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SUPT7LO94864 414 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FXR2P51116 673 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 AFF1P51825 1210 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SIK1P57059 783 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SLFN12Q8IYM2 578 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TRIM43Q96BQ3 446 aaPredicted RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GCNT4Q9P109 453 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CLTCL1P53675 1640 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF804BA4D1E1 1349 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 OR5F1O95221 314 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ENDOUP21128 410 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MAGEA8P43361 318 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FKBP3Q00688 224 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PID1Q7Z2X4 250 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MINDY2Q8NBR6 621 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 UCMAQ8WVF2 138 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PSKH2Q96QS6 385 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ERP44Q9BS26 406 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FUT8Q9BYC5 575 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF355PQ9NSJ1 428 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SMAD9O15198 467 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KERAO60938 352 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CAMK2DQ13557 499 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TMC4Q7Z404 712 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 LGALS16A8MUM7 142 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GSG1L2A8MUP6 293 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 M0R036 132 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CSN2P05814 226 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CDH15P55291 814 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RAB4BP61018 213 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FOXO4P98177 505 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PLGLB1Q02325 96 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CCNG2Q16589 344 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ALG1LQ6GMV1 187 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 USP38Q8NB14 1042 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms