RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MIEF2Q96C03 454 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 UGT1A7Q9HAW7 530 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 UGT1A10Q9HAW8 530 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 UGT1A8Q9HAW9 530 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 DTLQ9NZJ0 730 aa15.12■□□□□ 0.01
CDH1-213ENST00000612417 FCHO1O14526 889 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 LIN7AO14910 233 aaPredicted RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 IGFBP6P24592 240 aaPredicted RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 ADORA2BP29275 332 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 FDFT1P37268 417 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 SARNPP82979 210 aaKnown RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 BMPR2Q13873 1038 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 FAM182AQ5T1J6 154 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 DSTYKQ6XUX3 929 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 BZW1Q7L1Q6 419 aaKnown RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 PSTKQ8IV42 348 aaKnown RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 MPP5Q8N3R9 675 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 ARMC2Q8NEN0 867 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 PRR11Q96HE9 360 aaPredicted RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 HSFY1Q96LI6 401 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 EIF2B3Q9NR50 452 aaKnown RBP15.11■□□□□ 0.01
CDH1-213ENST00000612417 MAD1L1Q9Y6D9 718 aa15.11■□□□□ 0.01
CDH1-213ENST00000612417 A0A0A0MRY4 1105 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 FAM237BA0A1B0GVD1 139 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 GYG2O15488 501 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 ENTPD5O75356 428 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 LUC7L3O95232 432 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 CCDC130P13994 396 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 ATXN1P54253 815 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 TMPRSS15P98073 1019 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 MBTPS1Q14703 1052 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 WSCD1Q658N2 575 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 MARK2Q7KZI7 788 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 CCDC185Q8N715 623 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 ACMSDQ8TDX5 336 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TFB1MQ8WVM0 346 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 HTR3CQ8WXA8 447 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TNIP3Q96KP6 325 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 SPATA13Q96N96 652 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 MECRQ9BV79 373 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 NMUR2Q9GZQ4 415 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TSC2P49815 1807 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 CAPN14A8MX76 684 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 BPGMP07738 259 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 WARSP23381 471 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 RPL9P32969 192 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 GCKP35557 465 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 NAA25Q14CX7 972 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 CHI3L2Q15782 390 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 HSF5Q4G112 596 aaPredicted RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 CES4AQ5XG92 561 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TRAF7Q6Q0C0 670 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 KYAT3Q6YP21 454 aaKnown RBP15.1■□□□□ 0.01
CDH1-213ENST00000612417 LRRC8DQ7L1W4 858 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 LIMS2Q7Z4I7 341 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TTC7BQ86TV6 843 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 OSTM1Q86WC4 334 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 NUDCD3Q8IVD9 361 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 NDUFAF2Q8N183 169 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TTC8Q8TAM2 541 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 LRRN4Q8WUT4 740 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 SLC13A1Q9BZW2 595 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 WWP1Q9H0M0 922 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 PCMTD2Q9NV79 361 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 TAS2R1Q9NYW7 299 aa15.1■□□□□ 0.01
CDH1-213ENST00000612417 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDH1-213ENST00000612417 SF3B1O75533 1304 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDH1-213ENST00000612417 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
CDH1-213ENST00000612417 CCL5P13501 91 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 VAV1P15498 845 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 SELPP16109 830 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 MATKP42679 507 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 NIPAL4Q0D2K0 466 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 NAB1Q13506 487 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 BFSP2Q13515 415 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 TAF11Q15544 211 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 EFHC1Q5JVL4 640 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 RFWD3Q6PCD5 774 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 CCNJLQ8IV13 435 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 STKLD1Q8NE28 680 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 KCNV2Q8TDN2 545 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 DEPDC1BQ8WUY9 529 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 NAF1Q96HR8 494 aaKnown RBP15.09■□□□□ 0.01
CDH1-213ENST00000612417 PAAF1Q9BRP4 392 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 TRIM56Q9BRZ2 755 aaKnown RBP15.09■□□□□ 0.01
CDH1-213ENST00000612417 ARHGEF4Q9NR80 690 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 RGS18Q9NS28 235 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 FZD10Q9ULW2 581 aa15.09■□□□□ 0.01
CDH1-213ENST00000612417 TIMM13Q9Y5L4 95 aaPredicted RBP15.09■□□□□ 0.01
CDH1-213ENST00000612417 C2orf71A6NGG8 1288 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 GOT1P17174 413 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 ACAT1P24752 427 aaKnown RBP15.08■□□□□ 0.01
CDH1-213ENST00000612417 ARL4AP40617 200 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 GRIA1P42261 906 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 PTDSS1P48651 473 aaKnown RBP15.08■□□□□ 0.01
CDH1-213ENST00000612417 CDK7P50613 346 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 UPP1Q16831 310 aa15.08■□□□□ 0.01
CDH1-213ENST00000612417 SLC25A52Q3SY17 297 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms