RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 VPS13AQ96RL7 3174 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 MYO18AQ92614 2054 aaKnown RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 DLDP09622 509 aaKnown RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 SKILP12757 684 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 HOXB2P14652 356 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 POLR2EP19388 210 aaKnown RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 TFE3P19532 575 aaPredicted RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 RRM1P23921 792 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 FNTBP49356 437 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 CDH4P55283 916 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 ATP11AP98196 1134 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 NRG1Q02297 640 aaPredicted RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 MAMLD1Q13495 774 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 BYSLQ13895 437 aaKnown RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 STARD3Q14849 445 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 TMEM92Q6UXU6 159 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 ADIPOR2Q86V24 386 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 CCAR2Q8N163 923 aaKnown RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 CARNMT1Q8N4J0 409 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 FNIP1Q8TF40 1166 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 GAB3Q8WWW8 586 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 NTAN1Q96AB6 310 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 TTC17Q96AE7 1141 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 RPRD1AQ96P16 312 aaPredicted RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 HHIPQ96QV1 700 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 DNAJC7Q99615 494 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 NCAPGQ9BPX3 1015 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 CNPY3Q9BT09 278 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 CIPCQ9C0C6 399 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 OSBPL2Q9H1P3 480 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 ZNHIT6Q9NWK9 470 aaKnown RBP14.74□□□□□ -0.05
HDDC2-209ENST00000609477 TAS2R14Q9NYV8 317 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 STIM2Q9P246 746 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 ADAMTS1Q9UHI8 967 aa14.74□□□□□ -0.05
HDDC2-209ENST00000609477 IGLV3-10A0A075B6K4 115 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.73□□□□□ -0.05
HDDC2-209ENST00000609477 PRR23AA6NEV1 266 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 DRGXA6NNA5 263 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 TMCO5BA8MYB1 307 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 ADRA1BP35368 520 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 PLK1P53350 603 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 SULT2A1Q06520 285 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 ZNF177Q13360 481 aaPredicted RBP14.73□□□□□ -0.05
HDDC2-209ENST00000609477 USP39Q53GS9 565 aaKnown RBP14.73□□□□□ -0.05
HDDC2-209ENST00000609477 TMEM215Q68D42 235 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 MBLAC2Q68D91 279 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 CNGA4Q8IV77 575 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 CFAP52Q8N1V2 620 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 SUMF1Q8NBK3 374 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 FAM172AQ8WUF8 416 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 MCEEQ96PE7 176 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 PHOX2BQ99453 314 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDDC2-209ENST00000609477 TRIM5Q9C035 493 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 SIK2Q9H0K1 926 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 FBRSQ9HAH7 460 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 PPARGC1AQ9UBK2 798 aaKnown RBP14.73□□□□□ -0.05
HDDC2-209ENST00000609477 RAB23Q9ULC3 237 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 VANGL2Q9ULK5 521 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 TBC1D30Q9Y2I9 924 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 STON1Q9Y6Q2 735 aa14.73□□□□□ -0.05
HDDC2-209ENST00000609477 A0A1W2PQF6 199 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 SSU72P8A0A1W2PR75 194 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 HRO43593 1189 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 RPP40O75818 363 aaKnown RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 SRPRAP08240 638 aaKnown RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 C7P10643 843 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 HOXD11P31277 338 aaPredicted RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 CD70P32970 193 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 MRE11P49959 708 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 VASPP50552 380 aaPredicted RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 HDAC4P56524 1084 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 RPL7AP62424 266 aaKnown RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 DMWDQ09019 674 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 SCAPQ12770 1279 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 LMAN2Q12907 356 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 ZNF234Q14588 700 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 ACAP1Q15027 740 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 CDO1Q16878 200 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 C15orf59Q2T9L4 293 aaPredicted RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 HEATR6Q6AI08 1181 aaKnown RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 PHLDB2Q86SQ0 1253 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 SETD3Q86TU7 594 aaPredicted RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 METTL3Q86U44 580 aaKnown RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 FAM131BQ86XD5 332 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 ZNF683Q8IZ20 524 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 WFDC5Q8TCV5 224 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 IGSF8Q969P0 613 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 MYEOVQ96EZ4 313 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 ZC3H10Q96K80 434 aaKnown RBP14.72□□□□□ -0.05
HDDC2-209ENST00000609477 ACOX2Q99424 681 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 CD248Q9HCU0 757 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 OR12D3Q9UGF7 316 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 SUN2Q9UH99 717 aa14.72□□□□□ -0.05
HDDC2-209ENST00000609477 MYO15AQ9UKN7 3530 aa14.71□□□□□ -0.05
HDDC2-209ENST00000609477 TCRBV21S2A2A0A5A6 115 aa14.71□□□□□ -0.05
HDDC2-209ENST00000609477 FAM170AA1A519 330 aa14.71□□□□□ -0.05
HDDC2-209ENST00000609477 ANTXRLA6NF34 631 aa14.71□□□□□ -0.05
HDDC2-209ENST00000609477 TMEM191CA6NGB0 347 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms