RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 E2F8A0AVK6 867 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 APOC4-APOC2K7ER74 178 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 FGF10O15520 208 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-214ENST00000608108 APOC2P02655 101 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 TCF3P15923 654 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 ERCC2P18074 760 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-214ENST00000608108 RABGAP1LQ5R372 815 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 ARTNQ5T4W7 220 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 ZNF572Q7Z3I7 529 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-214ENST00000608108 BBS7Q8IWZ6 715 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 ZDHHC14Q8IZN3 488 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 LGI2Q8N0V4 545 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 PLD5Q8N7P1 536 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 CEP112Q8N8E3 955 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 IGSF8Q969P0 613 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 HAUS1Q96CS2 278 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 CARD6Q9BX69 1037 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 CATSPERBQ9H7T0 1116 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
CTCFL-214ENST00000608108 ETNK2Q9NVF9 386 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 MPP6Q9NZW5 540 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 PPARGC1AQ9UBK2 798 aaKnown RBP11.48□□□□□ -0.57
CTCFL-214ENST00000608108 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
CTCFL-214ENST00000608108 SHROOM3Q8TF72 1996 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 IGLV3-10A0A075B6K4 115 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 CTAGE15A4D2H0 777 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 TRDMT1O14717 391 aaKnown RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 DCLK1O15075 740 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 CTAGE8P0CG41 777 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 ZFXP17010 805 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 TGM2P21980 687 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 VIPR2P41587 438 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 IRAK1P51617 712 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 VCPP55072 806 aaKnown RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 C2orf54Q08AI8 447 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 SIX1Q15475 284 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 NCBP2-AS2Q69YL0 99 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 TMCO3Q6UWJ1 677 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 CTAGE6Q86UF2 777 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 CIR1Q86X95 450 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 CTAGE4Q8IX94 777 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 FAM217AQ8IXS0 508 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 SPATA4Q8NEY3 305 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 SUSD6Q92537 303 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 MYEOVQ96EZ4 313 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 PRICKLE1Q96MT3 831 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 MYADMQ96S97 322 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 ZYG11BQ9C0D3 744 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 PRDM16Q9HAZ2 1276 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 RBM12Q9NTZ6 932 aaKnown RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 SAE1Q9UBE0 346 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 KIF26AQ9ULI4 1882 aaPredicted RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 R3HDM2Q9Y2K5 976 aaKnown RBP11.47□□□□□ -0.57
CTCFL-214ENST00000608108 NR2E1Q9Y466 385 aa11.47□□□□□ -0.57
CTCFL-214ENST00000608108 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-214ENST00000608108 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
CTCFL-214ENST00000608108 MFSD11O43934 449 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 TSPAN3O60637 253 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 CNTN5O94779 1100 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 PECAM1P16284 738 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-214ENST00000608108 CHKAP35790 457 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 OTUD4Q01804 1114 aaKnown RBP11.46□□□□□ -0.57
CTCFL-214ENST00000608108 GBE1Q04446 702 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.57
CTCFL-214ENST00000608108 C5orf22Q49AR2 442 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 ALFQ53S48 1182 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 C1orf228Q6PIY5 440 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 NPNTQ6UXI9 565 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 CFAP52Q8N1V2 620 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 PRELID2Q8N945 189 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 ACTL9Q8TC94 416 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 ATG4AQ8WYN0 398 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 P3H4Q92791 437 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 RSPRY1Q96DX4 576 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 FAM118BQ9BPY3 351 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 TRPV4Q9HBA0 871 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 TBC1D14Q9P2M4 693 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 HEY1Q9Y5J3 304 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 ZFP37Q9Y6Q3 630 aaPredicted RBP11.46□□□□□ -0.57
CTCFL-214ENST00000608108 CHD5Q8TDI0 1954 aa11.46□□□□□ -0.57
CTCFL-214ENST00000608108 COL6A3P12111 3177 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 DRGXA6NNA5 263 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 CCDC188H7C350 402 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.58
CTCFL-214ENST00000608108 LAMP2P13473 410 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 RHOQP17081 205 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 FCARP24071 287 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 SERPINB6P35237 376 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 SGSHP51688 502 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 RPS24P62847 133 aaKnown RBP11.46□□□□□ -0.58
CTCFL-214ENST00000608108 TTC39BQ5VTQ0 682 aaPredicted RBP11.46□□□□□ -0.58
CTCFL-214ENST00000608108 TFAP2DQ7Z6R9 452 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 NLRP14Q86W24 1093 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 CPXM2Q8N436 756 aa11.46□□□□□ -0.58
CTCFL-214ENST00000608108 NPWQ8N729 165 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms