RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 DDX47Q9H0S4 455 aaKnown RBP17.01■□□□□ 0.31
PMF1-206ENST00000606952 TRPV4Q9HBA0 871 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 OBP2AQ9NY56 170 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 DONSONQ9NYP3 566 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 GDE1Q9NZC3 331 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 STIM2Q9P246 746 aa17.01■□□□□ 0.31
PMF1-206ENST00000606952 F5H5T6 163 aa17■□□□□ 0.31
PMF1-206ENST00000606952 MFSD11O43934 449 aa17■□□□□ 0.31
PMF1-206ENST00000606952 ZNF189O75820 626 aaPredicted RBP17■□□□□ 0.31
PMF1-206ENST00000606952 FSHRP23945 695 aa17■□□□□ 0.31
PMF1-206ENST00000606952 LTBRP36941 435 aa17■□□□□ 0.31
PMF1-206ENST00000606952 DYNLT1P63172 113 aa17■□□□□ 0.31
PMF1-206ENST00000606952 TTC39BQ5VTQ0 682 aaPredicted RBP17■□□□□ 0.31
PMF1-206ENST00000606952 AFMIDQ63HM1 303 aa17■□□□□ 0.31
PMF1-206ENST00000606952 TMCO3Q6UWJ1 677 aa17■□□□□ 0.31
PMF1-206ENST00000606952 DENND1CQ8IV53 801 aa17■□□□□ 0.31
PMF1-206ENST00000606952 C1orf54Q8WWF1 131 aa17■□□□□ 0.31
PMF1-206ENST00000606952 ATG4AQ8WYN0 398 aa17■□□□□ 0.31
PMF1-206ENST00000606952 RUBCNQ92622 972 aa17■□□□□ 0.31
PMF1-206ENST00000606952 P3H4Q92791 437 aa17■□□□□ 0.31
PMF1-206ENST00000606952 PRICKLE1Q96MT3 831 aaPredicted RBP17■□□□□ 0.31
PMF1-206ENST00000606952 KRT12Q99456 494 aa17■□□□□ 0.31
PMF1-206ENST00000606952 SMPD4Q9NXE4 827 aa17■□□□□ 0.31
PMF1-206ENST00000606952 DTLQ9NZJ0 730 aa17■□□□□ 0.31
PMF1-206ENST00000606952 VANGL2Q9ULK5 521 aa17■□□□□ 0.31
PMF1-206ENST00000606952 REV3LO60673 3130 aa17■□□□□ 0.31
PMF1-206ENST00000606952 FAM187AA6NFU0 413 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 HACD1B0YJ81 288 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 MCF2LO15068 1137 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 DAPK3O43293 454 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 PRAMEF12O95522 483 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 ITGAVP06756 1048 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 IRF1P10914 325 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 PTGIRP43119 386 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 MAPKAPK2P49137 400 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 GBE1Q04446 702 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 ZNF33AQ06730 810 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 SLC10A2Q12908 348 aaPredicted RBP16.99■□□□□ 0.31
PMF1-206ENST00000606952 BYSLQ13895 437 aaKnown RBP16.99■□□□□ 0.31
PMF1-206ENST00000606952 HABP4Q5JVS0 413 aaKnown RBP16.99■□□□□ 0.31
PMF1-206ENST00000606952 RABGAP1LQ5R372 815 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 CCDC137Q6PK04 289 aaKnown RBP16.99■□□□□ 0.31
PMF1-206ENST00000606952 NPNTQ6UXI9 565 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 CHST9Q7L1S5 443 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 UMODL1-AS1Q8N2C9 162 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 NPWQ8N729 165 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 ATL2Q8NHH9 583 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 RIN3Q8TB24 985 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 SH3RF2Q8TEC5 729 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 GRK7Q8WTQ7 553 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 IGSF8Q969P0 613 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 FAM161BQ96MY7 647 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 GAS2L1Q99501 681 aaPredicted RBP16.99■□□□□ 0.31
PMF1-206ENST00000606952 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 CFAP97Q9P2B7 532 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 FEZ2Q9UHY8 353 aaPredicted RBP16.99■□□□□ 0.31
PMF1-206ENST00000606952 DNPEPQ9ULA0 475 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 NEU2Q9Y3R4 380 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 MFHAS1Q9Y4C4 1052 aa16.99■□□□□ 0.31
PMF1-206ENST00000606952 GOLGA6L7A0A1B0GV03 622 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 BCLAF3A2AJT9 711 aaKnown RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 TARSL2A2RTX5 802 aaKnown RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 NCAM2O15394 837 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 MTHFRP42898 656 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 LMNB2Q03252 620 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 DLX2Q07687 328 aaPredicted RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 GALNT2Q10471 571 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 ATAT1Q5SQI0 421 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 MPP7Q5T2T1 576 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 CES5AQ6NT32 575 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 C8orf74Q6P047 294 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 SYDE1Q6ZW31 735 aaPredicted RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 MAATS1Q7Z4T9 603 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 KLHL7Q8IXQ5 586 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 LGI2Q8N0V4 545 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 CELF5Q8N6W0 485 aaKnown RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 SMRP1Q8NCR6 262 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 CCDC26Q8TAB7 109 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 ZSCAN18Q8TBC5 510 aaPredicted RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 OTUB2Q96DC9 234 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 RTP4Q96DX8 246 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 MYEOVQ96EZ4 313 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 RIPOR3Q96MK2 946 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 ZSWIM3Q96MP5 696 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 QKIQ96PU8 341 aaKnown RBP eCLIP16.98■□□□□ 0.31
PMF1-206ENST00000606952 CCL26Q9Y258 94 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 SH3BP1Q9Y3L3 701 aa16.98■□□□□ 0.31
PMF1-206ENST00000606952 NYNRINQ9P2P1 1898 aaKnown RBP16.98■□□□□ 0.31
PMF1-206ENST00000606952 NUP205Q92621 2012 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 BRWD1Q9NSI6 2320 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 CFAP69A5D8W1 941 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 RAD51CO43502 376 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 RBP3P10745 1247 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 IRAK1P51617 712 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 NDST2P52849 883 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 CDH4P55283 916 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 EIF3EP60228 445 aaKnown RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 ALFQ53S48 1182 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms