RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 NRF1Q16656 503 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 PEG10Q86TG7 708 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF75CPQ92670 426 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 DLG3Q92796 817 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NRDE2Q9H7Z3 1164 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 NMRAL1Q9HBL8 299 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CYB561D2O14569 222 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ACO1P21399 889 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 MRPS22P82650 360 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ADHFE1Q8IWW8 467 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 PROSCO94903 275 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 AENQ8WTP8 325 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 A1CFQ9NQ94 594 aaKnown RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CISHQ9NSE2 258 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 USP32Q8NFA0 1604 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 DLC1Q96QB1 1528 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 ZNF37AP17032 561 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 PUDPQ08623 228 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CCNIQ14094 377 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 RABL6Q3YEC7 729 aaPredicted RBP9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CD302Q8IX05 232 aa9.8□□□□□ -0.84
CSMD1-217ENST00000602723 CAMTA2O94983 1202 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 EPN2O95208 641 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ALADP13716 330 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 FDPSP14324 419 aaKnown RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ERMARDQ5T6L9 678 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 SLC25A23Q9BV35 468 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ADGRB3O60242 1522 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 MRASO14807 208 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 OGTO15294 1046 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 OR6B1O95007 311 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 MBL2P11226 248 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ATP4AP20648 1035 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PTSQ03393 145 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 COLGALT1Q8NBJ5 622 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 UBQLN1Q9UMX0 589 aaKnown RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PSMD12O00232 456 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 TEX28O15482 410 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 DYNC1LI2O43237 492 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CYP11B2P19099 503 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ADIGQ0VDE8 80 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 FAM117BQ6P1L5 589 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PTAR1Q7Z6K3 402 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 NT5DC3Q86UY8 548 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 C8orf59Q8N0T1 100 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 GPRC5AQ8NFJ5 357 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 UCMAQ8WVF2 138 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 C2CD2Q9Y426 696 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 HNMTP50135 292 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 SPANXN3Q5MJ09 141 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 FAM131BQ86XD5 332 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ULK2Q8IYT8 1036 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CMTM6Q9NX76 183 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 KCNK4Q9NYG8 393 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 TRPM5Q9NZQ8 1165 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PSMG1O95456 288 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PROCP04070 461 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 TCF7P36402 384 aaPredicted RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 NAB1Q13506 487 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 KIAA0100Q14667 2235 aaKnown RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 B3GAT3O94766 335 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CDK16Q00536 496 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 OR56A4Q8NGH8 313 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PTPRHQ9HD43 1115 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ARHGAP28Q9P2N2 729 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 H3BMM5 538 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CCNA2P20248 432 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 THPOP40225 353 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 PTDSS1P48651 473 aaKnown RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CASP4P49662 377 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 RHAGQ02094 409 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 RNF148Q8N7C7 305 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 FNIP1Q8TF40 1166 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 RXFP2Q8WXD0 754 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CDRT15Q96T59 188 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 SEMA6BQ9H3T3 888 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CCDC167Q9P0B6 97 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 NEXMIFQ5QGS0 1516 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 CBX4O00257 560 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 SYNCRIPO60506 623 aaKnown RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ICAM1P05362 532 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 GPR15P49685 360 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 FIGNQ5HY92 759 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 TMEM63BQ5T3F8 832 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 MTSS1LQ765P7 747 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 HERC6Q8IVU3 1022 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ZCCHC9Q8N567 271 aaKnown RBP9.79□□□□□ -0.84
CSMD1-217ENST00000602723 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 KIAA1683Q9H0B3 1180 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 RNPEPL1Q9HAU8 725 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 LYVE1Q9Y5Y7 322 aa9.79□□□□□ -0.84
CSMD1-217ENST00000602723 C15orf38-AP3S2A0A0A6YYH1 394 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 NAMPTP43490 491 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 RPL21P46778 160 aaKnown RBP9.78□□□□□ -0.84
CSMD1-217ENST00000602723 SCNN1BP51168 640 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 PKNOX1P55347 436 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 CDC42EP5Q6NZY7 148 aa9.78□□□□□ -0.84
CSMD1-217ENST00000602723 ARPINQ7Z6K5 226 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms