RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ODC1P11926 461 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 IER5Q5VY09 327 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 KLHL24Q6TFL4 600 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 PLA2G12BQ9BX93 195 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SLC25A13Q9UJS0 675 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CTDNEP1O95476 244 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 RARGP13631 454 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 FDFT1P37268 417 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SLC5A3P53794 718 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CDC16Q13042 620 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TRIM32Q13049 653 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 EXOC3L1Q86VI1 746 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 FBXW8Q8N3Y1 598 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SLC20A1Q8WUM9 679 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 LRMDAQ9H2I8 198 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TCF7L2Q9NQB0 619 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CHST12Q9NRB3 414 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 ERAP1Q9NZ08 941 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TPRP12270 2363 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 KCNQ2O43526 872 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CYP2C9P11712 490 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SLC26A3P40879 764 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 RPL21P46778 160 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CDC42EP1Q00587 391 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 GLRA4Q5JXX5 417 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CDC42EP5Q6NZY7 148 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 ZNF677Q86XU0 584 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 S100ZQ8WXG8 99 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 ARMC7Q9H6L4 198 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 OGDHLQ9ULD0 1010 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 MYH7BA7E2Y1 1941 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CCT8P50990 548 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 IL18R1Q13478 541 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 GSTA3Q16772 222 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 STRA8Q7Z7C7 330 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TPD52L3Q96J77 140 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ERGIC2Q96RQ1 377 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 MARCH7Q9H992 704 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TOR4AQ9NXH8 423 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SNAPC2Q13487 334 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 MAGEE2Q8TD90 523 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TK2O00142 265 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TOP3BO95985 862 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FXR2P51116 673 aaKnown RBP eCLIP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TUBA4AP68366 448 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FNBP1LQ5T0N5 605 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SP140LQ9H930 580 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SAR1AQ9NR31 198 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 PLA2G4CQ9UP65 541 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 EIF3LQ9Y262 564 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 AP4B1Q9Y6B7 739 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 UNC5CO95185 931 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 RASA1P20936 1047 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 PBLDP30039 288 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 RRM2P31350 389 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 DNAJC14Q6Y2X3 702 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ZCCHC23Q6ZST2 131 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 KRT78Q8N1N4 520 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ELMO1Q92556 727 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 GDF3Q9NR23 364 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 KBTBD13C9JR72 458 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 VPS26AO75436 327 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SGPL1O95470 568 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 HIPK1Q86Z02 1210 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TRPC4APQ8TEL6 797 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 UCMAQ8WVF2 138 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 RUVBL2Q9Y230 463 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 DDX3XO00571 662 aaKnown RBP eCLIP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ARMC6Q6NXE6 501 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 EIF3MQ7L2H7 374 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ALYREFQ86V81 257 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FAR2Q96K12 515 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SLITRK1Q96PX8 696 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 PPP1R10Q96QC0 940 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 POP1Q99575 1024 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 IQGAP1P46940 1657 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FRMPD1Q5SYB0 1578 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ANXA9O76027 345 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FAM86B2P0C5J1 330 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 NPEPPSP55786 919 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TPTEP56180 551 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 C1DQ13901 141 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 C15orf59Q2T9L4 293 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 MNTQ99583 582 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ING3Q9NXR8 418 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 KIAA1210Q9ULL0 1709 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TMCC2O75069 709 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 LBPP18428 481 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ME2P23368 584 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SKIV2L2P42285 1042 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ACLYP53396 1101 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FASTKQ14296 549 aaKnown RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ACAD10Q6JQN1 1059 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 SLC47A2Q86VL8 602 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 BDH2Q9BUT1 245 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 ETNK2Q9NVF9 386 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 VAV3Q9UKW4 847 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 PDE2AO00408 941 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 FESP07332 822 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 LPCAT4Q643R3 524 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms