RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	MYLK3	Q32MK0	819 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	SUPT20HL1	Q3ZLR7	823 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	CCDC92	Q53HC0	331 aa	Predicted RBP	12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	ZNF667	Q5HYK9	610 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	LPCAT4	Q643R3	524 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	KRT80	Q6KB66	452 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	PPP4R4	Q6NUP7	873 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	RNF111	Q6ZNA4	994 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	GADL1	Q6ZQY3	521 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	FAM196A	Q6ZSG2	479 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	GPR141	Q7Z602	305 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	CAMK1D	Q8IU85	385 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	ZFPM1	Q8IX07	1006 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	DSEL	Q8IZU8	1212 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	ZSWIM2	Q8NEG5	633 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	DQX1	Q8TE96	717 aa	Known RBP	12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	ZUFSP	Q96AP4	578 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	MAGED4	Q96JG8	741 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	CLPTM1L	Q96KA5	538 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	SPATA13	Q96N96	652 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	GPR101	Q96P66	508 aa	Predicted RBP	12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	GCNA	Q96QF7	691 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	SORT1	Q99523	831 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	NFKBIZ	Q9BYH8	718 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	UNC93B1	Q9H1C4	597 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	ZNF385D	Q9H6B1	395 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	LRRC40	Q9H9A6	602 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	GABBR1	Q9UBS5	961 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	FADS3	Q9Y5Q0	445 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	RPS6KL1	Q9Y6S9	549 aa		12.03	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	UBR3	Q6ZT12	1888 aa		12.02	□□□□□ -0.48
U2AF1L4-221	ENST00000601236	MYH9	P35579	1960 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236		A0A1B0GVG6	124 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	IQCA1L	A6NCM1	817 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	AQP12B	A6NM10	295 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	SOBP	A7XYQ1	873 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	SPATA31C2	B4DYI2	1134 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	DDX39A	O00148	427 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	SNAP91	O60641	907 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	USP1	O94782	785 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	UPP2	O95045	317 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	OAT	P04181	439 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	CSH1	P0DML2	217 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	CSH2	P0DML3	217 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	KCNA2	P16389	499 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	NCF2	P19878	526 aa	Predicted RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	PIK3R1	P27986	724 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	TYK2	P29597	1187 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	GLUD2	P49448	558 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	RPL14	P50914	215 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	LIMK2	P53671	638 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	MPP1	Q00013	466 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	MYBPC1	Q00872	1141 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	PRKCE	Q02156	737 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	PTPN11	Q06124	597 aa	Predicted RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ZNF33A	Q06730	810 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	INCA1	Q0VD86	236 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	PDE1C	Q14123	709 aa	Predicted RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	MOG	Q16653	247 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	UGCG	Q16739	394 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	COQ5	Q5HYK3	327 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	INTS6L	Q5JSJ4	861 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	SAMD4B	Q5PRF9	694 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	LIPM	Q5VYY2	423 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	FAM160B1	Q5W0V3	765 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	HEATR6	Q6AI08	1181 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	FBXL19	Q6PCT2	694 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	LCLAT1	Q6UWP7	414 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	FRMD7	Q6ZUT3	714 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	LPCAT2	Q7L5N7	544 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	KRT27	Q7Z3Y8	459 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ANKRD23	Q86SG2	305 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	HPS6	Q86YV9	775 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	AQP12A	Q8IXF9	295 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ANKRD13A	Q8IZ07	590 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ARFGAP1	Q8N6T3	406 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	DDHD1	Q8NEL9	900 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	FBXO27	Q8NI29	283 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	TSPEAR	Q8WU66	669 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	EME1	Q96AY2	570 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	EFHD2	Q96C19	240 aa	Predicted RBP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ROPN1L	Q96C74	230 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	NRBF2	Q96F24	287 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	TSPAN18	Q96SJ8	248 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	VAT1	Q99536	393 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	EBF4	Q9BQW3	602 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	TRMO	Q9BU70	441 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	C1orf50	Q9BV19	199 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ADAMTS10	Q9H324	1103 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ASB7	Q9H672	318 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	COG4	Q9H9E3	785 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	ZBTB26	Q9HCK0	441 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	XPNPEP3	Q9NQH7	507 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	KLHL11	Q9NVR0	708 aa		12.02	□□□□□ -0.49
U2AF1L4-221	ENST00000601236	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	12.02	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms