RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 ELF2Q15723 593 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 CCDC85BQ15834 202 aaPredicted RBP22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 ZNF77Q15935 545 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 RFWD3Q6PCD5 774 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 ASB16Q96NS5 453 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 PRDM16Q9HAZ2 1276 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 STIM2Q9P246 746 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 CDH7Q9ULB5 785 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 DOCK8Q8NF50 2099 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 DOCK4Q8N1I0 1966 aa22.74■■□□□ 1.23
SNRNP70-209ENST00000601065 DCLK1O15075 740 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 FOSL2P15408 326 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 MRPS25P82663 173 aaKnown RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 USP4Q13107 963 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 FAM78AQ5JUQ0 283 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 NCBP2-AS2Q69YL0 99 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 BBS7Q8IWZ6 715 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 FAM217AQ8IXS0 508 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 IGSF8Q969P0 613 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 MYEOVQ96EZ4 313 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 DDX50Q9BQ39 737 aaKnown RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 LRRC1Q9BTT6 524 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 POMKQ9H5K3 350 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 KIF9Q9HAQ2 790 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 CD207Q9UJ71 328 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 MFHAS1Q9Y4C4 1052 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 DRGXA6NNA5 263 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 APOC4-APOC2K7ER74 178 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 FGF10O15520 208 aaPredicted RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 APOC2P02655 101 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 ZFXP17010 805 aaPredicted RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 C5orf22Q49AR2 442 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 LGI2Q8N0V4 545 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 CELF5Q8N6W0 485 aaKnown RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 C1orf54Q8WWF1 131 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 SMARCD2Q92925 531 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 MAGOHBQ96A72 148 aaKnown RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 HAUS1Q96CS2 278 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 RPRD1AQ96P16 312 aaPredicted RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 CATSPERBQ9H7T0 1116 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 MPP6Q9NZW5 540 aa22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 SAE1Q9UBE0 346 aaPredicted RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 R3HDM2Q9Y2K5 976 aaKnown RBP22.73■■□□□ 1.23
SNRNP70-209ENST00000601065 UNC80Q8N2C7 3258 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 H3BQ06 376 aaPredicted RBP22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 PHF2O75151 1096 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 TGM2P21980 687 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 IRAK1P51617 712 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 C8orf74Q6P047 294 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 SUSD6Q92537 303 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 PRICKLE1Q96MT3 831 aaPredicted RBP22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 NECTIN4Q96NY8 510 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 ZYG11BQ9C0D3 744 aa22.72■■□□□ 1.23
SNRNP70-209ENST00000601065 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 TRDMT1O14717 391 aaKnown RBP22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 PECAM1P16284 738 aaPredicted RBP22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 CYP1B1Q16678 543 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 TMCO3Q6UWJ1 677 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 NPNTQ6UXI9 565 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 ATG4AQ8WYN0 398 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 MYADMQ96S97 322 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 FAM118BQ9BPY3 351 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 TRPV4Q9HBA0 871 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 USP15Q9Y4E8 981 aaPredicted RBP22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 GFRA2O00451 464 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 CNTN5O94779 1100 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 PAFAH1B3Q15102 231 aaKnown RBP22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 ALFQ53S48 1182 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 CCDC70Q6NSX1 233 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 NLRP14Q86W24 1093 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 TTC13Q8NBP0 860 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 P3H4Q92791 437 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 RSPRY1Q96DX4 576 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 LRRC3BQ96PB8 259 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 UBE2ZQ9H832 354 aaPredicted RBP22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 ANKZF1Q9H8Y5 726 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 AMACRQ9UHK6 382 aa22.71■■□□□ 1.23
SNRNP70-209ENST00000601065 WASH4PA8MWX3 477 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 RHOQP17081 205 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 KCNA5P22460 613 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 CHRNA3P32297 505 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 CHKAP35790 457 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 VIPR2P41587 438 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 SGSHP51688 502 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 OTUD4Q01804 1114 aaKnown RBP22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 GBE1Q04446 702 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 SNX1Q13596 522 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 SKIV2LQ15477 1246 aaKnown RBP22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 RABGAP1LQ5R372 815 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 C1orf228Q6PIY5 440 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 CPXM2Q8N436 756 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 GPR161Q8N6U8 529 aaKnown RBP22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 RTL3Q8N8U3 475 aaKnown RBP22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 C12orf50Q8NA57 414 aaPredicted RBP22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 ACTL9Q8TC94 416 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 LRRC19Q9H756 370 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 HEY1Q9Y5J3 304 aa22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 ZFP37Q9Y6Q3 630 aaPredicted RBP22.7■■□□□ 1.22
SNRNP70-209ENST00000601065 RAD51CO43502 376 aa22.69■■□□□ 1.22
SNRNP70-209ENST00000601065 MFSD11O43934 449 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms