RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RSPH9Q9H1X1 276 aaPredicted RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 IL21RQ9HBE5 538 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 POPDC2Q9HBU9 364 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 SGK2Q9HBY8 427 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 OSGEPQ9NPF4 335 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 TM7SF3Q9NS93 570 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 INTS6Q9UL03 887 aaKnown RBP17.61■□□□□ 0.41
SCAF1-204ENST00000601038 SCML1Q9UN30 329 aa17.61■□□□□ 0.41
SCAF1-204ENST00000601038 A0A1B0GVT2 93 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 LUC7L3O95232 432 aaKnown RBP17.6■□□□□ 0.41
SCAF1-204ENST00000601038 APOEP02649 317 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 YWHAZP63104 245 aaKnown RBP17.6■□□□□ 0.41
SCAF1-204ENST00000601038 ARID5BQ14865 1188 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 HNRNPA1L2Q32P51 320 aaKnown RBP17.6■□□□□ 0.41
SCAF1-204ENST00000601038 DCAF6Q58WW2 860 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 FSCBQ5H9T9 825 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 DBX2Q6ZNG2 339 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 USP30Q70CQ3 517 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 GLRX5Q86SX6 157 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 CFAP52Q8N1V2 620 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 ADAMTS14Q8WXS8 1223 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 BIRC7Q96CA5 298 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 MRGPRX3Q96LB0 322 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 MTG2Q9H4K7 406 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 THAP9Q9H5L6 903 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 CYTH4Q9UIA0 394 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 XPO7Q9UIA9 1087 aaKnown RBP17.6■□□□□ 0.41
SCAF1-204ENST00000601038 PCOLCE2Q9UKZ9 415 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 SLCO1B1Q9Y6L6 691 aa17.6■□□□□ 0.41
SCAF1-204ENST00000601038 CEP295Q9C0D2 2601 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 E5RJQ4 531 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 THAP12O43422 761 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 TRUB2O95900 331 aaKnown RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 MOCS2O96007 188 aaPredicted RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 IGLV3-25P01717 112 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 FTH1P19P0C7X4 201 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 GNA15P30679 374 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 TEAD4Q15561 434 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 ZC3H12AQ5D1E8 599 aaKnown RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 PITRM1Q5JRX3 1037 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 LGI2Q8N0V4 545 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 SETD7Q8WTS6 366 aaKnown RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 BTN2A3PQ96KV6 586 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 CRACR2AQ9BSW2 395 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 PABPC3Q9H361 631 aaKnown RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 ACP6Q9NPH0 428 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 KIAA1522Q9P206 1035 aaPredicted RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 RWDD2AQ9UIY3 292 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 ERVW-1Q9UQF0 538 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 NCKAP1Q9Y2A7 1128 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 FNDC3AQ9Y2H6 1198 aaKnown RBP17.59■□□□□ 0.41
SCAF1-204ENST00000601038 PCDHGB2Q9Y5G2 931 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 KNL1Q8NG31 2342 aa17.59■□□□□ 0.41
SCAF1-204ENST00000601038 RNASEH1O60930 286 aaKnown RBP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 SIN3BO75182 1162 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 FSBPO95073 299 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 MOCS3O95396 460 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 SRPRAP08240 638 aaKnown RBP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 CD27P26842 260 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 GRIA4P48058 902 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 SFSWAPQ12872 951 aaKnown RBP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 EIF4EBP2Q13542 120 aaPredicted RBP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 KIF19Q2TAC6 998 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 C9orf64Q5T6V5 341 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 MMS22LQ6ZRQ5 1243 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 ZCCHC14Q8WYQ9 949 aaKnown RBP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 TM9SF3Q9HD45 589 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 KIAA1468Q9P260 1216 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 TJP2Q9UDY2 1190 aa17.58■□□□□ 0.4
SCAF1-204ENST00000601038 APOBEC2Q9Y235 224 aaKnown RBP17.58■□□□□ 0.4
SCAF1-204ENST00000601038 TARSL2A2RTX5 802 aaKnown RBP17.57■□□□□ 0.4
SCAF1-204ENST00000601038 BECN2A8MW95 431 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 SLC9A1P19634 815 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 TACR2P21452 398 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 ECT2LQ008S8 904 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 PDCLQ13371 301 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 SUZ12Q15022 739 aaKnown RBP17.57■□□□□ 0.4
SCAF1-204ENST00000601038 RAP1GAP2Q684P5 730 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 SMYD5Q6GMV2 418 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 GJB7Q6PEY0 223 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 GBP6Q6ZN66 633 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 CHSY1Q86X52 802 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 CREBRFQ8IUR6 639 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 DHX40Q8IX18 779 aaKnown RBP17.57■□□□□ 0.4
SCAF1-204ENST00000601038 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 GANCQ8TET4 914 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 FBXL12Q9NXK8 326 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 APEX2Q9UBZ4 518 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 SLC12A6Q9UHW9 1150 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 ANKRD6Q9Y2G4 727 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 SNX11Q9Y5W9 270 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 CABIN1Q9Y6J0 2220 aa17.57■□□□□ 0.4
SCAF1-204ENST00000601038 FRYQ5TBA9 3013 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 ITIH6Q6UXX5 1313 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 EDDM13A0A1B0GTR0 161 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 SRRM3A6NNA2 597 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-204ENST00000601038 KCNU1A8MYU2 1149 aa17.56■□□□□ 0.4
SCAF1-204ENST00000601038 FLRT2O43155 660 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms