RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 NT5DC3Q86UY8 548 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM131BQ86XD5 332 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 MFSD6LQ8IWD5 586 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 CPXM2Q8N436 756 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM71BQ8TC56 605 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 BPIFB1Q8TDL5 484 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 DDX50Q9BQ39 737 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 TKTL2Q9H0I9 626 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 RETREG1Q9H6L5 497 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 ZSCAN32Q9NX65 697 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 SMPD4Q9NXE4 827 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 CFAP97Q9P2B7 532 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 FZD10Q9ULW2 581 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 SH3BP1Q9Y3L3 701 aa12.05□□□□□ -0.48
CHMP2A-207ENST00000600804 CCDC66A2RUB6 948 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 DCDC2BA2VCK2 349 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 HEPACAM2A8MVW5 462 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 I6L893 689 aaPredicted RBP12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 SPOPO43791 374 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 ACSL4O60488 711 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 PAGE1O75459 146 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 PSMC3P17980 439 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 CTNNA2P26232 953 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 IL1R2P27930 398 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 HOXC13P31276 330 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 L1CAMP32004 1257 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 CTNNA1P35221 906 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 CHKAP35790 457 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RPS9P46781 194 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 TAS2R40P59535 323 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 PFKPQ01813 784 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 SEMA3BQ13214 749 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 GRM2Q14416 872 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 DPYSL2Q16555 572 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RAB6CQ53S08 254 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RNF43Q68DV7 783 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 ZSCAN30Q86W11 494 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RHOT1Q8IXI2 618 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 CCDC185Q8N715 623 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 OSCP1Q8WVF1 389 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RNF34Q969K3 372 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RSPRY1Q96DX4 576 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 HES6Q96HZ4 224 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 LRRC3BQ96PB8 259 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 PEBP4Q96S96 227 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 PRMT1Q99873 361 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RAB6CQ9H0N0 254 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 RCOR3Q9P2K3 495 aaPredicted RBP12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 AMFRQ9UKV5 643 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 PCDHA3Q9Y5H8 950 aa12.04□□□□□ -0.48
CHMP2A-207ENST00000600804 CHD5Q8TDI0 1954 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 AKAP13Q12802 2813 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 IGLV3-10A0A075B6K4 115 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 TUBB4AP04350 444 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 RARAP10276 462 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 DEKP35659 375 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 VIPR2P41587 438 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 MAGEA9P43362 315 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 HCAR3P49019 387 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 ARSEP51690 589 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 GAS6Q14393 721 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 PDK2Q15119 407 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 PDGFRLQ15198 375 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 LPAL2Q16609 132 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM133BQ5BKY9 247 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 MS4A13Q5J8X5 152 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 ARTNQ5T4W7 220 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 MEI1Q5TIA1 1274 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 PIK3R6Q5UE93 754 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 MANEALQ5VSG8 457 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 SCYL2Q6P3W7 929 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 VITQ6UXI7 678 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 PEX26Q7Z412 305 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 KATNAL2Q8IYT4 538 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 RIN3Q8TB24 985 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 WBP2Q969T9 261 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 FAM83CQ9BQN1 747 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 SMG9Q9H0W8 520 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 PRDM16Q9HAZ2 1276 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 TRPV5Q9NQA5 729 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 ANLNQ9NQW6 1124 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 THG1LQ9NWX6 298 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 DDX56Q9NY93 547 aaKnown RBP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 MARK1Q9P0L2 795 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 AP4E1Q9UPM8 1137 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 HS3ST4Q9Y661 456 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 SPEGQ15772 3267 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 NUP205Q92621 2012 aa12.03□□□□□ -0.48
CHMP2A-207ENST00000600804 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.49
CHMP2A-207ENST00000600804 DRGXA6NNA5 263 aa12.02□□□□□ -0.49
CHMP2A-207ENST00000600804 TMEM110-MUSTN1A8MSY1 372 aa12.02□□□□□ -0.49
CHMP2A-207ENST00000600804 CHADO15335 359 aa12.02□□□□□ -0.49
CHMP2A-207ENST00000600804 HMBSP08397 361 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms