RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, human

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-208	ENST00000600628	RAB6C	Q9H0N0	254 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	ISCU	Q9H1K1	167 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	DUSP15	Q9H1R2	295 aa	Predicted RBP	9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	ZDHHC4	Q9NPG8	344 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	ABCB8	Q9NUT2	735 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	TAS2R14	Q9NYV8	317 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	GGA2	Q9UJY4	613 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	GMEB2	Q9UKD1	530 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	CAPN11	Q9UMQ6	739 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	TBC1D30	Q9Y2I9	924 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628	HS3ST4	Q9Y661	456 aa		9.09	□□□□□ -0.95
SSBP4-208	ENST00000600628		A0A1B0GVM2	712 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	TCAF2	A6NFQ2	919 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	DDX3X	O00571	662 aa	Known RBP eCLIP	9.08	□□□□□ -0.96	6e-6	■■■■■ 29.2
SSBP4-208	ENST00000600628	TBL1X	O60907	577 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	LUC7L3	O95232	432 aa	Known RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CALB1	P05937	261 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	DLD	P09622	509 aa	Known RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CCDC172	P0C7W6	258 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	PABPC1	P11940	636 aa	Known RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	RFC1	P35251	1148 aa	Predicted RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	IRAK1	P51617	712 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	ATXN1	P54253	815 aa	Known RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	HDAC4	P56524	1084 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	UBASH3A	P57075	661 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	SCAP	Q12770	1279 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	LMAN2	Q12907	356 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	SEMA3B	Q13214	749 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	SLC12A1	Q13621	1099 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	ZNF234	Q14588	700 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	FUT11	Q495W5	492 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	SPDYC	Q5MJ68	293 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	SH3PXD2A	Q5TCZ1	1133 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	PEAR1	Q5VY43	1037 aa	Predicted RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	RAP1GAP2	Q684P5	730 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	ACAD10	Q6JQN1	1059 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	WDR59	Q6PJI9	974 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CHST9	Q7L1S5	443 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	STRADA	Q7RTN6	431 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CACNA2D4	Q7Z3S7	1137 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	C14orf80	Q86SX3	495 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	KBTBD6	Q86V97	674 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	AHI1	Q8N157	1196 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	FAM160A2	Q8N612	972 aa	Predicted RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	EMC1	Q8N766	993 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	ATP6V0D2	Q8N8Y2	350 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	OR52K2	Q8NGK3	314 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	MRGPRX1	Q96LB2	322 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CFAP57	Q96MR6	1250 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	C11orf70	Q9BRQ4	267 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	NUP58	Q9BVL2	599 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	MKRN2	Q9H000	416 aa	Known RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	HAUS4	Q9H6D7	363 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	SYNC	Q9H7C4	482 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	FAM204A	Q9H8W3	233 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CACNA2D2	Q9NY47	1150 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	ADAM22	Q9P0K1	906 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	IFNK	Q9P0W0	207 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	MBD1	Q9UIS9	605 aa	Predicted RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	STAP1	Q9ULZ2	295 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	STON1	Q9Y6Q2	735 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CNOT1	A5YKK6	2376 aa	Known RBP	9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	KNL1	Q8NG31	2342 aa		9.08	□□□□□ -0.96
SSBP4-208	ENST00000600628	CXorf51A	A0A1B0GTR3	108 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ALDH1A2	O94788	518 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	MOCS2	O96007	188 aa	Predicted RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	SERPINC1	P01008	464 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	HOXB2	P14652	356 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	PDGFRA	P16234	1089 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	NDUFV2	P19404	249 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ABCB4	P21439	1286 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	PRKCH	P24723	683 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ADRA1B	P35368	520 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	NSF	P46459	744 aa	Known RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ZNF143	P52747	638 aa	Predicted RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	RPL7A	P62424	266 aa	Known RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ZBED6	P86452	979 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	OGDH	Q02218	1023 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ARID5A	Q03989	594 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ZNF252P-AS1	Q0IIN9	211 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	SPEM2	Q0P670	501 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	E2F5	Q15329	346 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ASTE1	Q2TB18	679 aa	Predicted RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	PLEKHG6	Q3KR16	790 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	SFMBT2	Q5VUG0	894 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	PMS2CL	Q68D20	193 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	MBLAC2	Q68D91	279 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ANO7	Q6IWH7	933 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	PPP1R2P3	Q6NXS1	205 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	DRC7	Q8IY82	874 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	LGI2	Q8N0V4	545 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	CCAR2	Q8N163	923 aa	Known RBP	9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	CFAP52	Q8N1V2	620 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	ARFGAP1	Q8N6T3	406 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	RXFP2	Q8WXD0	754 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	SORCS1	Q8WY21	1168 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	NTAN1	Q96AB6	310 aa		9.07	□□□□□ -0.96
SSBP4-208	ENST00000600628	DNAJC7	Q99615	494 aa		9.07	□□□□□ -0.96

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