RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SIPA1Q96FS4 1042 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 SIK2Q9H0K1 926 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 CLEC4EQ9ULY5 219 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 MYO6Q9UM54 1294 aa14.62□□□□□ -0.07
LIG1-218ENST00000599322 A0A1B0GVM2 712 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 DCDC2BA2VCK2 349 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 TCAF2A6NFQ2 919 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 WASH3PC4AMC7 463 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 KHNYNO15037 678 aaKnown RBP14.61□□□□□ -0.07
LIG1-218ENST00000599322 NDUFV2P19404 249 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 SULT2A1Q06520 285 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 FUT11Q495W5 492 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 SYCP2LQ5T4T6 812 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 LYSMD4Q5XG99 296 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 IL31Q6EBC2 164 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 KIAA1211LQ6NV74 962 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 ARCQ7LC44 396 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 RABEPKQ7Z6M1 372 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 METTL3Q86U44 580 aaKnown RBP14.61□□□□□ -0.07
LIG1-218ENST00000599322 TMPRSS6Q8IU80 811 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 DHX40Q8IX18 779 aaKnown RBP14.61□□□□□ -0.07
LIG1-218ENST00000599322 SLC20A1Q8WUM9 679 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 SORCS1Q8WY21 1168 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 PIGKQ92643 395 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 FOXJ1Q92949 421 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 MRGPRX1Q96LB2 322 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 NPY6RQ99463 290 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 RTKNQ9BST9 563 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 SELENOOQ9BVL4 669 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 RTN4Q9NQC3 1192 aaKnown RBP14.61□□□□□ -0.07
LIG1-218ENST00000599322 ADAM22Q9P0K1 906 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 NOCTQ9UK39 431 aaKnown RBP14.61□□□□□ -0.07
LIG1-218ENST00000599322 CYP8B1Q9UNU6 501 aa14.61□□□□□ -0.07
LIG1-218ENST00000599322 NUP205Q92621 2012 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 BCLAF3A2AJT9 711 aaKnown RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 CYP1A1P04798 512 aaPredicted RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 TPM3P06753 285 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 TNFAIP3P21580 790 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 MMP8P22894 467 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 SDC4P31431 198 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 CD70P32970 193 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 RDXP35241 583 aaKnown RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 SGSHP51688 502 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 PITX1P78337 314 aaPredicted RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 LMAN2Q12907 356 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 ENPP2Q13822 863 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 MAP7D1Q3KQU3 841 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 MMS22LQ6ZRQ5 1243 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 KIAA0907Q7Z7F0 614 aaPredicted RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 ADIPOR2Q86V24 386 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 TMEFF1Q8IYR6 380 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 OR2T3Q8NH03 318 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 CYB5D2Q8WUJ1 264 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 ERLEC1Q96DZ1 483 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 PGAP3Q96FM1 320 aaPredicted RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 PRICKLE1Q96MT3 831 aaPredicted RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 AGPAT1Q99943 283 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 C11orf70Q9BRQ4 267 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 NUSAP1Q9BXS6 441 aaKnown RBP14.6□□□□□ -0.07
LIG1-218ENST00000599322 TKTL2Q9H0I9 626 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 HCN2Q9UL51 889 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 NCKAP1Q9Y2A7 1128 aa14.6□□□□□ -0.07
LIG1-218ENST00000599322 A0A1W2PQC6 194 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 EPHB6O15197 1021 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 PAGE1O75459 146 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CLDN11O75508 207 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 DNTTP04053 509 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 SRPRAP08240 638 aaKnown RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 CHRM1P11229 460 aaPredicted RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 KRT3P12035 628 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 PDGFRAP16234 1089 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 BCKDHBP21953 392 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CSKP41240 450 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CXCR3P49682 368 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 ECT2LQ008S8 904 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 FMO1Q01740 532 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 AUHQ13825 339 aaKnown RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 ASIC2Q16515 512 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 TTC31Q49AM3 519 aaPredicted RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 PITRM1Q5JRX3 1037 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 WDR45BQ5MNZ6 344 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 TMEM215Q68D42 235 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 ARMCX6Q7L4S7 300 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 RGL4Q8IZJ4 473 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CCAR2Q8N163 923 aaKnown RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 KDM1BQ8NB78 822 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CEP76Q8TAP6 659 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 TTC17Q96AE7 1141 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CNTNAP3BQ96NU0 1288 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 TBCBQ99426 244 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 NUP58Q9BVL2 599 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 CNTNAP3Q9BZ76 1288 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 METTL5Q9NRN9 209 aaKnown RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 PIGVQ9NUD9 493 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 XPO7Q9UIA9 1087 aaKnown RBP14.59□□□□□ -0.07
LIG1-218ENST00000599322 SLC25A13Q9UJS0 675 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 VANGL2Q9ULK5 521 aa14.59□□□□□ -0.07
LIG1-218ENST00000599322 MYO18AQ92614 2054 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms