RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 NAA35Q5VZE5 725 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CXorf57Q6NSI4 855 aaKnown RBP12.57□□□□□ -0.4
LIG1-217ENST00000599165 FBXL22Q6P050 247 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 KIAA1324Q6UXG2 1013 aaKnown RBP12.57□□□□□ -0.4
LIG1-217ENST00000599165 SERPINA13PQ6UXR4 307 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 LPCAT2Q7L5N7 544 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 DGLUCYQ7Z3D6 616 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 C14orf80Q86SX3 495 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CHSY1Q86X52 802 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 TMPRSS6Q8IU80 811 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 ZNF683Q8IZ20 524 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 APCDD1Q8J025 514 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 UCMAQ8WVF2 138 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CPA5Q8WXQ8 436 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 ALG14Q96F25 216 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 SPACA7Q96KW9 195 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.57□□□□□ -0.4
LIG1-217ENST00000599165 COX16Q9P0S2 106 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 PILRBQ9UKJ0 227 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 CHD5Q8TDI0 1954 aa12.57□□□□□ -0.4
LIG1-217ENST00000599165 M0QYT0 321 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 CDX4O14627 284 aaPredicted RBP12.56□□□□□ -0.4
LIG1-217ENST00000599165 TEX33O43247 280 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 PAGE1O75459 146 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 ADCY5O95622 1261 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 EPHX1P07099 455 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 CXCR3P49682 368 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 NUMBP49757 651 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 IRX4P78413 519 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 CDR2Q01850 454 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 NME3Q13232 169 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 C5orf22Q49AR2 442 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 AASDHQ4L235 1098 aaPredicted RBP12.56□□□□□ -0.4
LIG1-217ENST00000599165 PITRM1Q5JRX3 1037 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 SPDYCQ5MJ68 293 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 FKBP15Q5T1M5 1219 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 LYSMD4Q5XG99 296 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 CAVIN1Q6NZI2 390 aaKnown RBP12.56□□□□□ -0.4
LIG1-217ENST00000599165 CYP2U1Q7Z449 544 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 CACUL1Q86Y37 369 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 ZDHHC17Q8IUH5 632 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 CARNMT1Q8N4J0 409 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 PIGKQ92643 395 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 C18orf8Q96DM3 657 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
LIG1-217ENST00000599165 TBCBQ99426 244 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 DDX50Q9BQ39 737 aaKnown RBP12.56□□□□□ -0.4
LIG1-217ENST00000599165 PRDM16Q9HAZ2 1276 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 PRSS16Q9NQE7 514 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 ARHGEF38Q9NXL2 777 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 WSB2Q9NYS7 404 aaPredicted RBP12.56□□□□□ -0.4
LIG1-217ENST00000599165 SNX10Q9Y5X0 201 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 HS3ST4Q9Y661 456 aa12.56□□□□□ -0.4
LIG1-217ENST00000599165 MAP3K13O43283 966 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 FOXD2O60548 495 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 ZNF217O75362 1048 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 GJB6O95452 261 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 UNGP13051 313 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 MMP8P22894 467 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 CCR1P32246 355 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 TPMTP51580 245 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 RNASE9P60153 205 aaKnown RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 RPL6Q02878 288 aaKnown RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 ZNF33AQ06730 810 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 AUHQ13825 339 aaKnown RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 STARD3Q14849 445 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 IQCB1Q15051 598 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 PLEKHG6Q3KR16 790 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 FNDC3BQ53EP0 1204 aaKnown RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 FAM102AQ5T9C2 384 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 STPG1Q5TH74 334 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 SYT12Q8IV01 421 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 CCAR2Q8N163 923 aaKnown RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 ATP6V0D2Q8N8Y2 350 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 C12orf50Q8NA57 414 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 OR2T3Q8NH03 318 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 ZNF419Q96HQ0 510 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 BPIFA3Q9BQP9 254 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 SYT11Q9BT88 431 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 SYNCQ9H7C4 482 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 FSCN3Q9NQT6 498 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
LIG1-217ENST00000599165 EVLQ9UI08 416 aaPredicted RBP12.55□□□□□ -0.4
LIG1-217ENST00000599165 CEP83Q9Y592 693 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 OR51B4Q9Y5P0 310 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
LIG1-217ENST00000599165 DOCK9Q9BZ29 2069 aa12.54□□□□□ -0.4
LIG1-217ENST00000599165 TPRP12270 2363 aaKnown RBP12.54□□□□□ -0.4
LIG1-217ENST00000599165 TCRBV5S1A1TA0A578 114 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms