RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ACP6Q9NPH0 428 aa12.56□□□□□ -0.4
SOX2-OT-228ENST00000597828 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
SOX2-OT-228ENST00000597828 TJP2Q9UDY2 1190 aa12.56□□□□□ -0.4
SOX2-OT-228ENST00000597828 KIAA1257Q9ULG3 409 aa12.56□□□□□ -0.4
SOX2-OT-228ENST00000597828 PLA2G4CQ9UP65 541 aa12.56□□□□□ -0.4
SOX2-OT-228ENST00000597828 FAM47DPA6NHR8 397 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 BIN1O00499 593 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 IGHV4-34P06331 123 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 ATXN1LP0C7T5 689 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 ZNF883P0CG24 379 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 C7P10643 843 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 RDXP35241 583 aaKnown RBP12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 SLC11A2P49281 568 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 E2F5Q15329 346 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 SYPL2Q5VXT5 272 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 ZNF776Q68DI1 518 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 DENND1BQ6P3S1 775 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 GLRX5Q86SX6 157 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 UNC45BQ8IWX7 931 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 SCUBE3Q8IX30 993 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 MDM1Q8TC05 714 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 FAM149B1Q96BN6 582 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 DHTKD1Q96HY7 919 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 TIGD1Q96MW7 591 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 PCED1AQ9H1Q7 454 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 RSPH9Q9H1X1 276 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 CYTH4Q9UIA0 394 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 LOC400499M0QZD8 3231 aa12.55□□□□□ -0.4
SOX2-OT-228ENST00000597828 A0A1W2PP55 124 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 TTC34A8MYJ7 566 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 H0Y8X5 98 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 PMM2O15305 246 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 MID1O15344 667 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 ATP5BP06576 529 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 KRT5P13647 590 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 GPD2P43304 727 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 GRIA4P48058 902 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 STK19P49842 368 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 AFF3P51826 1226 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 KCNH2Q12809 1159 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 STIM1Q13586 685 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 CDH18Q13634 790 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 TTC31Q49AM3 519 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 DCAF6Q58WW2 860 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 MS4A13Q5J8X5 152 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 PITRM1Q5JRX3 1037 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 MPP7Q5T2T1 576 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 RAP1GAP2Q684P5 730 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 GJB7Q6PEY0 223 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 IL27RAQ6UWB1 636 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 CIR1Q86X95 450 aaPredicted RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 TRIM59Q8IWR1 403 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 APCDD1Q8J025 514 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 FIBINQ8TAL6 211 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 RHBDD1Q8TEB9 315 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 GOLGA1Q92805 767 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 HSFY1Q96LI6 401 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 SERPINB11Q96P15 392 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 INTS2Q9H0H0 1204 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 PABPC3Q9H361 631 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 FBRSQ9HAH7 460 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 EBF2Q9HAK2 575 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 APOBEC2Q9Y235 224 aaKnown RBP12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 TLR6Q9Y2C9 796 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 ANKRD6Q9Y2G4 727 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 KNTC1P50748 2209 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 BAHCC1Q9P281 2608 aa12.54□□□□□ -0.4
SOX2-OT-228ENST00000597828 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 URB1O60287 2271 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 E5RJQ4 531 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 FLRT2O43155 660 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 IRAK2O43187 625 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 PAPSS1O43252 624 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 FBXO21O94952 628 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 CD27P26842 260 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 PSMD8P48556 350 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 RPL34P49207 117 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 APBA1Q02410 837 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 GCNT1Q02742 428 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 STILQ15468 1287 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 HNRNPA1L2Q32P51 320 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 CCDC157Q569K6 752 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 KIAA0895LQ68EN5 471 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 NCEH1Q6PIU2 408 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 C19orf48Q6RUI8 117 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 DBX2Q6ZNG2 339 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 CHSY1Q86X52 802 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 MMAAQ8IVH4 418 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 LGI2Q8N0V4 545 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 EHBP1Q8NDI1 1231 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 GANCQ8TET4 914 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 AZIN2Q96A70 460 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms