RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 KRT39Q6A163 491 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 KLHL10Q6JEL2 608 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 AHI1Q8N157 1196 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 MLKLQ8NB16 471 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 MYEOVQ96EZ4 313 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 DHTKD1Q96HY7 919 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 RSPH9Q9H1X1 276 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 PABPC3Q9H361 631 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 OLA1Q9NTK5 396 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 SUN2Q9UH99 717 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 RAI2Q9Y5P3 530 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 A0A1W2PPC4 97 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 FAM47DPA6NHR8 397 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 E9PAM4 449 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 ATP5BP06576 529 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 SLC6A4P31645 630 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 GTF2H1P32780 548 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 ADAM9Q13443 819 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 KCNJ12Q14500 433 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 FAM133BQ5BKY9 247 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 NCEH1Q6PIU2 408 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 CCDC150Q8NCX0 1101 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 UBA3Q8TBC4 463 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 RNF139Q8WU17 664 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 FAXDC2Q96IV6 333 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 ELF4Q99607 663 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 DNAI2Q9GZS0 605 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 PRORYQ9H606 182 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 RAB20Q9NX57 234 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 FBXL12Q9NXK8 326 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 TSPAN16Q9UKR8 245 aa17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 INTS6Q9UL03 887 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-215ENST00000597649 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 A0A1W2PR77 199 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 BICDL2A1A5D9 508 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ENC1O14682 589 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 MID1O15344 667 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 DFNA5O60443 496 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 TBL1XO60907 577 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 SIN3BO75182 1162 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 LDOC1O95751 146 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 LATS1O95835 1130 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 JUPP14923 745 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 POLR2EP19388 210 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 BMP6P22004 513 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ABCG1P45844 678 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 C21orf59P57076 290 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ZNF445P59923 1031 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ADIGQ0VDE8 80 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ZCWPW2Q504Y3 356 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 USP30Q70CQ3 517 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 SAP25Q8TEE9 199 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 GANCQ8TET4 914 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 GOLGA1Q92805 767 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 MRGPRX3Q96LB0 322 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 UBL7Q96S82 380 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ACE2Q9BYF1 805 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 ANO10Q9NW15 660 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 CTNND2Q9UQB3 1225 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 PCDHGA1Q9Y5H4 931 aa17.09■□□□□ 0.33
SHKBP1-215ENST00000597649 SHROOM3Q8TF72 1996 aa17.08■□□□□ 0.33
SHKBP1-215ENST00000597649 A0A1W2PP55 124 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 PPP1R3GB7ZBB8 358 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 IGLV3-27P01718 113 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 EIF2S3P41091 472 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 SLC8A3P57103 927 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 SEMG2Q02383 582 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 TARDBPQ13148 414 aaKnown RBP eCLIP17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 PAK1Q13153 545 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 STX1AQ16623 288 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 MPP7Q5T2T1 576 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 C9orf64Q5T6V5 341 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 NADSYN1Q6IA69 706 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 TTC39CQ8N584 583 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 SLC39A7Q92504 469 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 TSC1Q92574 1164 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 CNDP2Q96KP4 475 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 FAM129BQ96TA1 746 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 ABCC13Q9NSE7 274 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 STIM2Q9P246 746 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 NCKAP1Q9Y2A7 1128 aa17.08■□□□□ 0.32
SHKBP1-215ENST00000597649 SYCE3A1L190 88 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 CSKP41240 450 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 CTSOP43234 321 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 ACADVLP49748 655 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 MXI1P50539 228 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 DAOAP59103 153 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 LRRC63Q05C16 580 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms